Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SKP1P63208 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SKP1P63208 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SKP1P63208 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SKP1P63208 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.95■□□□□ 0.78
SKP1P63208 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SKP1P63208 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.95■□□□□ 0.78
SKP1P63208 AC022517.1-201ENST00000592429 346 ntBASIC19.95■□□□□ 0.78
SKP1P63208 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SKP1P63208 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SKP1P63208 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.95■□□□□ 0.78
SKP1P63208 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SKP1P63208 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SKP1P63208 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SKP1P63208 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.95■□□□□ 0.78
SKP1P63208 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SKP1P63208 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SKP1P63208 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SKP1P63208 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKP1P63208 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.94■□□□□ 0.78
SKP1P63208 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKP1P63208 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.94■□□□□ 0.78
SKP1P63208 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SKP1P63208 SLC7A5P1-201ENST00000568957 537 ntBASIC19.94■□□□□ 0.78
SKP1P63208 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKP1P63208 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SKP1P63208 AC244015.2-201ENST00000616358 1861 ntBASIC19.94■□□□□ 0.78
SKP1P63208 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKP1P63208 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKP1P63208 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SKP1P63208 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKP1P63208 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SKP1P63208 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SKP1P63208 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.93■□□□□ 0.78
SKP1P63208 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.93■□□□□ 0.78
SKP1P63208 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SKP1P63208 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SKP1P63208 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.93■□□□□ 0.78
SKP1P63208 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SKP1P63208 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.93■□□□□ 0.78
SKP1P63208 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SKP1P63208 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SKP1P63208 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.93■□□□□ 0.78
SKP1P63208 KRT18P61-201ENST00000585825 1298 ntBASIC19.93■□□□□ 0.78
SKP1P63208 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.93■□□□□ 0.78
SKP1P63208 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SKP1P63208 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.93■□□□□ 0.78
SKP1P63208 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SKP1P63208 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SKP1P63208 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SKP1P63208 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKP1P63208 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SKP1P63208 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SKP1P63208 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKP1P63208 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
SKP1P63208 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKP1P63208 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SKP1P63208 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
SKP1P63208 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.92■□□□□ 0.78
SKP1P63208 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SKP1P63208 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SKP1P63208 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SKP1P63208 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SKP1P63208 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.91■□□□□ 0.78
SKP1P63208 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.91■□□□□ 0.78
SKP1P63208 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SKP1P63208 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.91■□□□□ 0.78
SKP1P63208 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.91■□□□□ 0.78
SKP1P63208 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.91■□□□□ 0.78
SKP1P63208 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SKP1P63208 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SKP1P63208 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SKP1P63208 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SKP1P63208 AC006015.1-201ENST00000429970 570 ntBASIC19.9■□□□□ 0.78
SKP1P63208 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.9■□□□□ 0.78
SKP1P63208 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.9■□□□□ 0.78
SKP1P63208 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.9■□□□□ 0.78
SKP1P63208 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.9■□□□□ 0.78
SKP1P63208 MYCNOS-205ENST00000641950 531 ntBASIC19.9■□□□□ 0.78
SKP1P63208 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms