Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC022517.1-201ENST00000592429 346 ntBASIC18.98■□□□□ 0.63
RPS4XP62701 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RPS4XP62701 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RPS4XP62701 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4XP62701 BX005040.4-201ENST00000637145 1518 ntBASIC18.98■□□□□ 0.63
RPS4XP62701 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4XP62701 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4XP62701 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS4XP62701 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS4XP62701 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.97■□□□□ 0.63
RPS4XP62701 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.97■□□□□ 0.63
RPS4XP62701 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS4XP62701 DUX4L2-201ENST00000561772 1275 ntBASIC18.97■□□□□ 0.63
RPS4XP62701 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
RPS4XP62701 DUX4L6-201ENST00000626483 1275 ntBASIC18.97■□□□□ 0.63
RPS4XP62701 DUX4L1-201ENST00000627662 1275 ntBASIC18.97■□□□□ 0.63
RPS4XP62701 DUX4L8-201ENST00000629013 1275 ntBASIC18.97■□□□□ 0.63
RPS4XP62701 DUX4L3-201ENST00000630187 1275 ntBASIC18.97■□□□□ 0.63
RPS4XP62701 DUX4L7-201ENST00000630678 1275 ntBASIC18.97■□□□□ 0.63
RPS4XP62701 DUX4L5-201ENST00000630834 1275 ntBASIC18.97■□□□□ 0.63
RPS4XP62701 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4XP62701 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RPS4XP62701 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.96■□□□□ 0.63
RPS4XP62701 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.96■□□□□ 0.63
RPS4XP62701 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.96■□□□□ 0.63
RPS4XP62701 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.96■□□□□ 0.63
RPS4XP62701 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS4XP62701 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.96■□□□□ 0.63
RPS4XP62701 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS4XP62701 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.96■□□□□ 0.63
RPS4XP62701 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.96■□□□□ 0.63
RPS4XP62701 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.96■□□□□ 0.63
RPS4XP62701 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4XP62701 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4XP62701 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4XP62701 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4XP62701 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
RPS4XP62701 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4XP62701 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.95■□□□□ 0.62
RPS4XP62701 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4XP62701 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RPS4XP62701 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.95■□□□□ 0.62
RPS4XP62701 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RPS4XP62701 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS4XP62701 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RPS4XP62701 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS4XP62701 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RPS4XP62701 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.95■□□□□ 0.62
RPS4XP62701 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.95■□□□□ 0.62
RPS4XP62701 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.95■□□□□ 0.62
RPS4XP62701 RARRES2P11-201ENST00000635158 484 ntBASIC18.95■□□□□ 0.62
RPS4XP62701 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4XP62701 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RPS4XP62701 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS4XP62701 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4XP62701 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4XP62701 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RPS4XP62701 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4XP62701 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4XP62701 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4XP62701 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4XP62701 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS4XP62701 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
RPS4XP62701 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4XP62701 IKBKGP1-201ENST00000612193 1073 ntBASIC18.94■□□□□ 0.62
RPS4XP62701 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4XP62701 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4XP62701 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4XP62701 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS4XP62701 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RPS4XP62701 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
RPS4XP62701 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4XP62701 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4XP62701 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4XP62701 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4XP62701 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4XP62701 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPS4XP62701 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms