Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRP54P61011 AC061975.6-201ENST00000579045 1553 ntBASIC20.74■□□□□ 0.91
SRP54P61011 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SRP54P61011 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRP54P61011 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRP54P61011 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRP54P61011 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRP54P61011 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRP54P61011 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.73■□□□□ 0.91
SRP54P61011 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.73■□□□□ 0.91
SRP54P61011 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SRP54P61011 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRP54P61011 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRP54P61011 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.73■□□□□ 0.91
SRP54P61011 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRP54P61011 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.73■□□□□ 0.91
SRP54P61011 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.73■□□□□ 0.91
SRP54P61011 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.73■□□□□ 0.91
SRP54P61011 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRP54P61011 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.73■□□□□ 0.91
SRP54P61011 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRP54P61011 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRP54P61011 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRP54P61011 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRP54P61011 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SRP54P61011 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SRP54P61011 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRP54P61011 AC068338.2-201ENST00000563278 1430 ntBASIC20.72■□□□□ 0.91
SRP54P61011 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.72■□□□□ 0.91
SRP54P61011 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.72■□□□□ 0.91
SRP54P61011 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.72■□□□□ 0.91
SRP54P61011 AC007322.4-201ENST00000509611 723 ntBASIC20.72■□□□□ 0.91
SRP54P61011 AF201337.1-201ENST00000520239 748 ntBASIC20.72■□□□□ 0.91
SRP54P61011 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.72■□□□□ 0.91
SRP54P61011 AC133552.2-202ENST00000575694 574 ntBASIC20.72■□□□□ 0.91
SRP54P61011 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SRP54P61011 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.72■□□□□ 0.91
SRP54P61011 FAM99A-202ENST00000538190 1989 ntBASIC20.72■□□□□ 0.91
SRP54P61011 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SRP54P61011 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SRP54P61011 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SRP54P61011 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 SLC29A4P1-201ENST00000398760 971 ntBASIC20.71■□□□□ 0.91
SRP54P61011 GUSBP6-202ENST00000438529 1198 ntBASIC20.71■□□□□ 0.91
SRP54P61011 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.71■□□□□ 0.91
SRP54P61011 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.71■□□□□ 0.91
SRP54P61011 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.71■□□□□ 0.91
SRP54P61011 AC105036.2-201ENST00000569468 176 ntBASIC20.71■□□□□ 0.91
SRP54P61011 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SRP54P61011 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.71■□□□□ 0.91
SRP54P61011 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRP54P61011 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SRP54P61011 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRP54P61011 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRP54P61011 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.7■□□□□ 0.9
SRP54P61011 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRP54P61011 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.7■□□□□ 0.9
SRP54P61011 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SRP54P61011 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SRP54P61011 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SRP54P61011 AC142086.2-201ENST00000569753 217 ntBASIC20.7■□□□□ 0.9
SRP54P61011 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.7■□□□□ 0.9
SRP54P61011 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SRP54P61011 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRP54P61011 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SRP54P61011 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRP54P61011 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRP54P61011 AC010542.4-201ENST00000563151 1910 ntBASIC20.7■□□□□ 0.9
SRP54P61011 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRP54P61011 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SRP54P61011 AC068473.5-201ENST00000616428 2072 ntBASIC20.69■□□□□ 0.9
SRP54P61011 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRP54P61011 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRP54P61011 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.69■□□□□ 0.9
SRP54P61011 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.69■□□□□ 0.9
SRP54P61011 CYP2T1P-201ENST00000432607 1285 ntBASIC20.69■□□□□ 0.9
SRP54P61011 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRP54P61011 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRP54P61011 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRP54P61011 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRP54P61011 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.69■□□□□ 0.9
SRP54P61011 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.69■□□□□ 0.9
SRP54P61011 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRP54P61011 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.69■□□□□ 0.9
SRP54P61011 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRP54P61011 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRP54P61011 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRP54P61011 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.68■□□□□ 0.9
SRP54P61011 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.68■□□□□ 0.9
SRP54P61011 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms