Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 AC008694.1-202ENST00000636953 945 ntBASIC25.08■■□□□ 1.61
PPP4CP60510 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PPP4CP60510 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PPP4CP60510 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
PPP4CP60510 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PPP4CP60510 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.07■■□□□ 1.6
PPP4CP60510 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PPP4CP60510 AC069152.1-201ENST00000438030 544 ntBASIC25.07■■□□□ 1.6
PPP4CP60510 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PPP4CP60510 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PPP4CP60510 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.07■■□□□ 1.6
PPP4CP60510 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PPP4CP60510 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PPP4CP60510 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPP4CP60510 ECEL1P1-201ENST00000373592 1742 ntBASIC25.06■■□□□ 1.6
PPP4CP60510 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.06■■□□□ 1.6
PPP4CP60510 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.06■■□□□ 1.6
PPP4CP60510 MIPEPP3-201ENST00000412105 444 ntBASIC25.06■■□□□ 1.6
PPP4CP60510 AC091799.1-201ENST00000422823 811 ntBASIC25.06■■□□□ 1.6
PPP4CP60510 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPP4CP60510 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.06■■□□□ 1.6
PPP4CP60510 RARRES2P4-201ENST00000514074 484 ntBASIC25.06■■□□□ 1.6
PPP4CP60510 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.06■■□□□ 1.6
PPP4CP60510 AC133041.1-202ENST00000642053 222 ntBASIC25.06■■□□□ 1.6
PPP4CP60510 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPP4CP60510 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPP4CP60510 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.06■■□□□ 1.6
PPP4CP60510 MKRN4P-201ENST00000444706 1521 ntBASIC25.06■■□□□ 1.6
PPP4CP60510 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPP4CP60510 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.06■■□□□ 1.6
PPP4CP60510 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PPP4CP60510 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.05■■□□□ 1.6
PPP4CP60510 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PPP4CP60510 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PPP4CP60510 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.05■■□□□ 1.6
PPP4CP60510 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.05■■□□□ 1.6
PPP4CP60510 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.05■■□□□ 1.6
PPP4CP60510 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.05■■□□□ 1.6
PPP4CP60510 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PPP4CP60510 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PPP4CP60510 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
PPP4CP60510 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.04■■□□□ 1.6
PPP4CP60510 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4CP60510 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4CP60510 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4CP60510 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4CP60510 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4CP60510 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4CP60510 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4CP60510 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4CP60510 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.04■■□□□ 1.6
PPP4CP60510 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC25.04■■□□□ 1.6
PPP4CP60510 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4CP60510 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.04■■□□□ 1.6
PPP4CP60510 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PPP4CP60510 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.03■■□□□ 1.6
PPP4CP60510 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4CP60510 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4CP60510 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4CP60510 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4CP60510 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4CP60510 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.03■■□□□ 1.6
PPP4CP60510 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4CP60510 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.03■■□□□ 1.6
PPP4CP60510 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4CP60510 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.03■■□□□ 1.6
PPP4CP60510 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4CP60510 MIR4758-201ENST00000577688 71 ntBASIC25.03■■□□□ 1.6
PPP4CP60510 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4CP60510 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.03■■□□□ 1.6
PPP4CP60510 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PPP4CP60510 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.03■■□□□ 1.6
PPP4CP60510 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4CP60510 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4CP60510 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4CP60510 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4CP60510 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
PPP4CP60510 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4CP60510 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.02■■□□□ 1.6
PPP4CP60510 AC098934.4-201ENST00000564127 592 ntBASIC25.02■■□□□ 1.6
PPP4CP60510 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
PPP4CP60510 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPP4CP60510 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PPP4CP60510 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
PPP4CP60510 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PPP4CP60510 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PPP4CP60510 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.01■■□□□ 1.59
PPP4CP60510 AC245052.3-201ENST00000450182 901 ntBASIC25.01■■□□□ 1.59
PPP4CP60510 KRT18P6-201ENST00000555540 1265 ntBASIC25.01■■□□□ 1.59
PPP4CP60510 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
PPP4CP60510 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PPP4CP60510 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
PPP4CP60510 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
PPP4CP60510 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25■■□□□ 1.59
PPP4CP60510 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25■■□□□ 1.59
PPP4CP60510 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25■■□□□ 1.59
PPP4CP60510 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PPP4CP60510 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PPP4CP60510 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PPP4CP60510 PPP1R14BP2-201ENST00000426284 444 ntBASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms