Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
CLRN1P58418 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
CLRN1P58418 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.76■□□□□ 0.59
CLRN1P58418 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CLRN1P58418 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
CLRN1P58418 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.75■□□□□ 0.59
CLRN1P58418 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.75■□□□□ 0.59
CLRN1P58418 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CLRN1P58418 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.75■□□□□ 0.59
CLRN1P58418 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 FEM1AP4-201ENST00000443167 1987 ntBASIC18.75■□□□□ 0.59
CLRN1P58418 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLRN1P58418 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLRN1P58418 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLRN1P58418 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 AC027612.3-201ENST00000413684 1047 ntBASIC18.74■□□□□ 0.59
CLRN1P58418 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLRN1P58418 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.74■□□□□ 0.59
CLRN1P58418 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLRN1P58418 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.74■□□□□ 0.59
CLRN1P58418 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.74■□□□□ 0.59
CLRN1P58418 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.73■□□□□ 0.59
CLRN1P58418 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLRN1P58418 AC079140.4-201ENST00000507448 529 ntBASIC18.73■□□□□ 0.59
CLRN1P58418 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.73■□□□□ 0.59
CLRN1P58418 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLRN1P58418 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CLRN1P58418 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.72■□□□□ 0.59
CLRN1P58418 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.72■□□□□ 0.59
CLRN1P58418 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLRN1P58418 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLRN1P58418 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLRN1P58418 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.72■□□□□ 0.59
CLRN1P58418 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.72■□□□□ 0.59
CLRN1P58418 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLRN1P58418 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLRN1P58418 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLRN1P58418 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLRN1P58418 AC005229.4-201ENST00000610085 2198 ntBASIC18.72■□□□□ 0.59
CLRN1P58418 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
CLRN1P58418 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.72■□□□□ 0.59
CLRN1P58418 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.72■□□□□ 0.59
CLRN1P58418 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLRN1P58418 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLRN1P58418 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 LINC02228-203ENST00000641970 1355 ntBASIC18.71■□□□□ 0.59
CLRN1P58418 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.71■□□□□ 0.59
CLRN1P58418 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.71■□□□□ 0.59
CLRN1P58418 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 AL024507.2-201ENST00000606070 2574 ntBASIC18.71■□□□□ 0.59
CLRN1P58418 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.71■□□□□ 0.59
CLRN1P58418 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.71■□□□□ 0.59
CLRN1P58418 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 AF106564.1-201ENST00000607058 2553 ntBASIC18.71■□□□□ 0.59
CLRN1P58418 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLRN1P58418 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLRN1P58418 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLRN1P58418 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLRN1P58418 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLRN1P58418 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLRN1P58418 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLRN1P58418 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLRN1P58418 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLRN1P58418 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLRN1P58418 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms