Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXG1P55316 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FOXG1P55316 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXG1P55316 AC080038.1-201ENST00000611274 1154 ntBASIC18.5■□□□□ 0.55
FOXG1P55316 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXG1P55316 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXG1P55316 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXG1P55316 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXG1P55316 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FOXG1P55316 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.49■□□□□ 0.55
FOXG1P55316 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXG1P55316 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXG1P55316 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXG1P55316 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXG1P55316 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.49■□□□□ 0.55
FOXG1P55316 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXG1P55316 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.49■□□□□ 0.55
FOXG1P55316 AC008175.2-201ENST00000612840 297 ntBASIC18.49■□□□□ 0.55
FOXG1P55316 BID-214ENST00000617586 542 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXG1P55316 RARRES2P11-201ENST00000635158 484 ntBASIC18.49■□□□□ 0.55
FOXG1P55316 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXG1P55316 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXG1P55316 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXG1P55316 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXG1P55316 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXG1P55316 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXG1P55316 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXG1P55316 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXG1P55316 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
FOXG1P55316 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXG1P55316 KRT18P20-201ENST00000548986 1279 ntBASIC18.48■□□□□ 0.55
FOXG1P55316 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXG1P55316 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.48■□□□□ 0.55
FOXG1P55316 AC073111.5-205ENST00000641717 521 ntBASIC18.48■□□□□ 0.55
FOXG1P55316 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
FOXG1P55316 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXG1P55316 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXG1P55316 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXG1P55316 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXG1P55316 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXG1P55316 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXG1P55316 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXG1P55316 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.47■□□□□ 0.55
FOXG1P55316 KRT18P11-201ENST00000435214 1283 ntBASIC18.47■□□□□ 0.55
FOXG1P55316 CDCA4P2-201ENST00000441182 718 ntBASIC18.47■□□□□ 0.55
FOXG1P55316 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXG1P55316 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXG1P55316 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXG1P55316 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
FOXG1P55316 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXG1P55316 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
FOXG1P55316 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
FOXG1P55316 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXG1P55316 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXG1P55316 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
FOXG1P55316 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FOXG1P55316 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXG1P55316 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 AC244015.2-201ENST00000616358 1861 ntBASIC18.46■□□□□ 0.55
FOXG1P55316 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 POU5F1P4-201ENST00000413175 1085 ntBASIC18.46■□□□□ 0.55
FOXG1P55316 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXG1P55316 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 AC090192.1-201ENST00000517740 490 ntBASIC18.46■□□□□ 0.55
FOXG1P55316 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
FOXG1P55316 DUX4L16-201ENST00000555130 1264 ntBASIC18.46■□□□□ 0.55
FOXG1P55316 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.46■□□□□ 0.55
FOXG1P55316 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXG1P55316 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
FOXG1P55316 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.46■□□□□ 0.54
FOXG1P55316 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.46■□□□□ 0.54
FOXG1P55316 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms