Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH11P55287 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 OXCT2P1-201ENST00000447263 1535 ntBASIC19.17■□□□□ 0.66
CDH11P55287 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDH11P55287 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH11P55287 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH11P55287 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDH11P55287 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CDH11P55287 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH11P55287 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CDH11P55287 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH11P55287 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH11P55287 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDH11P55287 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH11P55287 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH11P55287 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
CDH11P55287 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH11P55287 MIR6821-201ENST00000617625 74 ntBASIC19.16■□□□□ 0.66
CDH11P55287 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDH11P55287 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CDH11P55287 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH11P55287 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CDH11P55287 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH11P55287 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CDH11P55287 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH11P55287 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH11P55287 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH11P55287 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH11P55287 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH11P55287 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH11P55287 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH11P55287 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH11P55287 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH11P55287 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH11P55287 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH11P55287 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CDH11P55287 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CDH11P55287 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH11P55287 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH11P55287 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH11P55287 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH11P55287 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH11P55287 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CDH11P55287 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH11P55287 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH11P55287 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH11P55287 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.14■□□□□ 0.66
CDH11P55287 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH11P55287 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH11P55287 AC097381.1-201ENST00000429019 1296 ntBASIC19.14■□□□□ 0.65
CDH11P55287 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH11P55287 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.14■□□□□ 0.65
CDH11P55287 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.14■□□□□ 0.65
CDH11P55287 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH11P55287 AC068587.7-201ENST00000641602 218 ntBASIC19.14■□□□□ 0.65
CDH11P55287 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDH11P55287 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH11P55287 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH11P55287 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDH11P55287 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDH11P55287 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH11P55287 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH11P55287 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH11P55287 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH11P55287 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH11P55287 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH11P55287 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH11P55287 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDH11P55287 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH11P55287 OR2I1P-207ENST00000453522 948 ntBASIC19.13■□□□□ 0.65
CDH11P55287 IGHV3-19-201ENST00000521488 291 ntBASIC19.13■□□□□ 0.65
CDH11P55287 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.13■□□□□ 0.65
CDH11P55287 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH11P55287 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH11P55287 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CDH11P55287 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH11P55287 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CDH11P55287 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH11P55287 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH11P55287 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH11P55287 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH11P55287 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms