Protein–RNA interactions for Protein: P54999

SMX3, Small nuclear ribonucleoprotein F, yeastyeast

Predicted RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMX3P54999 OAF1YAL051W 3144 nt3.73□□□□□ -1.81
SMX3P54999 RPN3YER021W 1572 nt3.72□□□□□ -1.81
SMX3P54999 RAD1YPL022W 3303 nt3.72□□□□□ -1.81
SMX3P54999 SEC2YNL272C 2280 nt3.72□□□□□ -1.81
SMX3P54999 ARF2YDL137W 546 nt3.72□□□□□ -1.81
SMX3P54999 API2YDR525W 330 nt3.72□□□□□ -1.81
SMX3P54999 YER046W-AYER046W-A 330 nt3.72□□□□□ -1.81
SMX3P54999 YER135CYER135C 393 nt3.72□□□□□ -1.81
SMX3P54999 tQ(UUG)CtQ(UUG)C 72 nt3.72□□□□□ -1.81
SMX3P54999 tQ(UUG)D1tQ(UUG)D1 72 nt3.72□□□□□ -1.81
SMX3P54999 tQ(UUG)D2tQ(UUG)D2 72 nt3.72□□□□□ -1.81
SMX3P54999 SOL4YGR248W 768 nt3.72□□□□□ -1.81
SMX3P54999 tQ(UUG)D3tQ(UUG)D3 72 nt3.72□□□□□ -1.81
SMX3P54999 tQ(UUG)E1tQ(UUG)E1 72 nt3.72□□□□□ -1.81
SMX3P54999 tQ(UUG)HtQ(UUG)H 72 nt3.72□□□□□ -1.81
SMX3P54999 tQ(UUG)LtQ(UUG)L 72 nt3.72□□□□□ -1.81
SMX3P54999 RPS20YHL015W 366 nt3.72□□□□□ -1.81
SMX3P54999 ENT3YJR125C 1227 nt3.72□□□□□ -1.81
SMX3P54999 YNL089CYNL089C 477 nt3.72□□□□□ -1.81
SMX3P54999 GRE2YOL151W 1029 nt3.72□□□□□ -1.81
SMX3P54999 YBR062CYBR062C 543 nt3.72□□□□□ -1.81
SMX3P54999 YAR1YPL239W 603 nt3.72□□□□□ -1.81
SMX3P54999 CMD1YBR109C 444 nt3.72□□□□□ -1.81
SMX3P54999 LAS21YJL062W 2493 nt3.72□□□□□ -1.81
SMX3P54999 YPK9YOR291W 4419 nt3.71□□□□□ -1.82
SMX3P54999 AIM7YDR063W 450 nt3.71□□□□□ -1.82
SMX3P54999 SEC53YFL045C 765 nt3.71□□□□□ -1.82
SMX3P54999 YGL039WYGL039W 1047 nt3.71□□□□□ -1.82
SMX3P54999 MTM1YGR257C 1101 nt3.71□□□□□ -1.82
SMX3P54999 VMA10YHR039C-A 345 nt3.71□□□□□ -1.82
SMX3P54999 SAE3YHR079C-A 276 nt3.71□□□□□ -1.82
SMX3P54999 DPH1YIL103W 1278 nt3.71□□□□□ -1.82
SMX3P54999 YIL165CYIL165C 360 nt3.71□□□□□ -1.82
SMX3P54999 PRM10YJL108C 1152 nt3.71□□□□□ -1.82
SMX3P54999 RPL40BYKR094C 387 nt3.71□□□□□ -1.82
SMX3P54999 AFB1YLR040C 675 nt3.71□□□□□ -1.82
SMX3P54999 CIN5YOR028C 888 nt3.71□□□□□ -1.82
SMX3P54999 YOR053WYOR053W 342 nt3.71□□□□□ -1.82
SMX3P54999 YOR392WYOR392W 444 nt3.71□□□□□ -1.82
SMX3P54999 snR54snR54 86 nt3.71□□□□□ -1.82
SMX3P54999 VAC7YNL054W 3498 nt3.71□□□□□ -1.82
SMX3P54999 TCO89YPL180W 2400 nt3.7□□□□□ -1.82
SMX3P54999 PMC1YGL006W 3522 nt3.7□□□□□ -1.82
SMX3P54999 VFA1YER128W 612 nt3.7□□□□□ -1.82
SMX3P54999 YGL108CYGL108C 423 nt3.7□□□□□ -1.82
SMX3P54999 ERG3YLR056W 1098 nt3.7□□□□□ -1.82
SMX3P54999 VPS63YLR261C 327 nt3.7□□□□□ -1.82
SMX3P54999 FLD1YLR404W 858 nt3.7□□□□□ -1.82
SMX3P54999 YML108WYML108W 318 nt3.7□□□□□ -1.82
SMX3P54999 DDP1YOR163W 567 nt3.7□□□□□ -1.82
SMX3P54999 EXO5YBR163W 1758 nt3.7□□□□□ -1.82
SMX3P54999 DAL5YJR152W 1632 nt3.7□□□□□ -1.82
SMX3P54999 YCF1YDR135C 4548 nt3.69□□□□□ -1.82
SMX3P54999 NUP133YKR082W 3474 nt3.69□□□□□ -1.82
SMX3P54999 RTS3YGR161C 792 nt3.69□□□□□ -1.82
SMX3P54999 YKE2YLR200W 345 nt3.69□□□□□ -1.82
SMX3P54999 CMC2YBL059C-A 330 nt3.69□□□□□ -1.82
SMX3P54999 SUI1YNL244C 327 nt3.69□□□□□ -1.82
SMX3P54999 MPD2YOL088C 834 nt3.69□□□□□ -1.82
SMX3P54999 YOR331CYOR331C 558 nt3.69□□□□□ -1.82
SMX3P54999 AFT2YPL202C 1251 nt3.69□□□□□ -1.82
SMX3P54999 FLC1YPL221W 2382 nt3.68□□□□□ -1.82
SMX3P54999 PET54YGR222W 882 nt3.68□□□□□ -1.82
SMX3P54999 YIL014C-AYIL014C-A 315 nt3.68□□□□□ -1.82
SMX3P54999 KTR2YKR061W 1278 nt3.68□□□□□ -1.82
SMX3P54999 IDP2YLR174W 1239 nt3.68□□□□□ -1.82
SMX3P54999 NKP2YLR315W 462 nt3.68□□□□□ -1.82
SMX3P54999 RIO2YNL207W 1278 nt3.68□□□□□ -1.82
SMX3P54999 YPR174CYPR174C 666 nt3.68□□□□□ -1.82
SMX3P54999 NOC2YOR206W 2133 nt3.68□□□□□ -1.82
SMX3P54999 CIT1YNR001C 1440 nt3.68□□□□□ -1.82
SMX3P54999 CDC40YDR364C 1368 nt3.67□□□□□ -1.82
SMX3P54999 STE24YJR117W 1362 nt3.67□□□□□ -1.82
SMX3P54999 SRO7YPR032W 3102 nt3.67□□□□□ -1.82
SMX3P54999 TAF7YMR227C 1773 nt3.67□□□□□ -1.82
SMX3P54999 RPL27BYDR471W 411 nt3.67□□□□□ -1.82
SMX3P54999 YIL171WYIL171W 330 nt3.67□□□□□ -1.82
SMX3P54999 SPC1YJR010C-A 285 nt3.67□□□□□ -1.82
SMX3P54999 HIT1YJR055W 495 nt3.67□□□□□ -1.82
SMX3P54999 BET3YKR068C 582 nt3.67□□□□□ -1.82
SMX3P54999 YBR076C-AYBR076C-A 267 nt3.67□□□□□ -1.82
SMX3P54999 PRP3YDR473C 1410 nt3.67□□□□□ -1.82
SMX3P54999 YHR214C-CYHR214C-C 1437 nt3.67□□□□□ -1.82
SMX3P54999 NCS2YNL119W 1482 nt3.67□□□□□ -1.82
SMX3P54999 snR59snR59 78 nt3.66□□□□□ -1.82
SMX3P54999 YDR262WYDR262W 819 nt3.66□□□□□ -1.82
SMX3P54999 ATP5YDR298C 639 nt3.66□□□□□ -1.82
SMX3P54999 GPI19YDR437W 423 nt3.66□□□□□ -1.82
SMX3P54999 YGR017WYGR017W 894 nt3.66□□□□□ -1.82
SMX3P54999 IRC18YJL037W 675 nt3.66□□□□□ -1.82
SMX3P54999 PDP3YLR455W 915 nt3.66□□□□□ -1.82
SMX3P54999 VAM10YOR068C 345 nt3.66□□□□□ -1.82
SMX3P54999 YBR051WYBR051W 351 nt3.66□□□□□ -1.82
SMX3P54999 YPR096CYPR096C 303 nt3.66□□□□□ -1.82
SMX3P54999 HUL5YGL141W 2733 nt3.66□□□□□ -1.82
SMX3P54999 RDH54YBR073W 2877 nt3.66□□□□□ -1.82
SMX3P54999 PAM1YDR251W 2493 nt3.66□□□□□ -1.82
SMX3P54999 PDR5YOR153W 4536 nt3.66□□□□□ -1.82
SMX3P54999 YNL284C-AYNL284C-A 1323 nt3.66□□□□□ -1.82
SMX3P54999 MNT4YNR059W 1743 nt3.65□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 26.5 ms