Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLNS1AP54105 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLNS1AP54105 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLNS1AP54105 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CLNS1AP54105 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.8■□□□□ 0.92
CLNS1AP54105 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.8■□□□□ 0.92
CLNS1AP54105 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLNS1AP54105 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLNS1AP54105 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLNS1AP54105 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLNS1AP54105 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLNS1AP54105 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLNS1AP54105 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLNS1AP54105 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLNS1AP54105 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLNS1AP54105 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.8■□□□□ 0.92
CLNS1AP54105 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.79■□□□□ 0.92
CLNS1AP54105 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CLNS1AP54105 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLNS1AP54105 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CLNS1AP54105 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLNS1AP54105 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLNS1AP54105 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLNS1AP54105 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.79■□□□□ 0.92
CLNS1AP54105 TSPY9P-201ENST00000440215 945 ntBASIC20.79■□□□□ 0.92
CLNS1AP54105 TSPY11P-201ENST00000442607 1045 ntBASIC20.79■□□□□ 0.92
CLNS1AP54105 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLNS1AP54105 AL499627.2-201ENST00000606283 725 ntBASIC20.79■□□□□ 0.92
CLNS1AP54105 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLNS1AP54105 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CLNS1AP54105 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLNS1AP54105 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLNS1AP54105 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CLNS1AP54105 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLNS1AP54105 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CLNS1AP54105 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLNS1AP54105 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLNS1AP54105 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.78■□□□□ 0.92
CLNS1AP54105 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLNS1AP54105 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLNS1AP54105 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.78■□□□□ 0.92
CLNS1AP54105 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.78■□□□□ 0.92
CLNS1AP54105 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.78■□□□□ 0.92
CLNS1AP54105 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLNS1AP54105 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLNS1AP54105 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLNS1AP54105 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLNS1AP54105 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLNS1AP54105 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CLNS1AP54105 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLNS1AP54105 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLNS1AP54105 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLNS1AP54105 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.77■□□□□ 0.92
CLNS1AP54105 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLNS1AP54105 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLNS1AP54105 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLNS1AP54105 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLNS1AP54105 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.77■□□□□ 0.91
CLNS1AP54105 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.77■□□□□ 0.91
CLNS1AP54105 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLNS1AP54105 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLNS1AP54105 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLNS1AP54105 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLNS1AP54105 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.76■□□□□ 0.91
CLNS1AP54105 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLNS1AP54105 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CLNS1AP54105 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLNS1AP54105 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLNS1AP54105 RARRES2P1-201ENST00000474487 481 ntBASIC20.76■□□□□ 0.91
CLNS1AP54105 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLNS1AP54105 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CLNS1AP54105 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.76■□□□□ 0.91
CLNS1AP54105 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLNS1AP54105 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLNS1AP54105 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLNS1AP54105 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLNS1AP54105 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLNS1AP54105 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLNS1AP54105 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLNS1AP54105 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
CLNS1AP54105 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CLNS1AP54105 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.75■□□□□ 0.91
CLNS1AP54105 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.75■□□□□ 0.91
CLNS1AP54105 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 AC009299.2-201ENST00000482477 511 ntBASIC20.75■□□□□ 0.91
CLNS1AP54105 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLNS1AP54105 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLNS1AP54105 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLNS1AP54105 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms