Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.85■□□□□ 0.93
LIMK1P53667 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.85■□□□□ 0.93
LIMK1P53667 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.85■□□□□ 0.93
LIMK1P53667 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.85■□□□□ 0.93
LIMK1P53667 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.85■□□□□ 0.93
LIMK1P53667 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LIMK1P53667 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.85■□□□□ 0.93
LIMK1P53667 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LIMK1P53667 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LIMK1P53667 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK1P53667 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.84■□□□□ 0.93
LIMK1P53667 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK1P53667 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.84■□□□□ 0.93
LIMK1P53667 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK1P53667 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK1P53667 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK1P53667 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK1P53667 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LIMK1P53667 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK1P53667 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.84■□□□□ 0.93
LIMK1P53667 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.84■□□□□ 0.93
LIMK1P53667 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK1P53667 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.84■□□□□ 0.93
LIMK1P53667 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.84■□□□□ 0.93
LIMK1P53667 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.84■□□□□ 0.93
LIMK1P53667 AC053503.5-201ENST00000601508 636 ntBASIC20.84■□□□□ 0.93
LIMK1P53667 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.84■□□□□ 0.93
LIMK1P53667 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIMK1P53667 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LIMK1P53667 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.84■□□□□ 0.93
LIMK1P53667 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LIMK1P53667 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.84■□□□□ 0.93
LIMK1P53667 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LIMK1P53667 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.83■□□□□ 0.93
LIMK1P53667 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.83■□□□□ 0.93
LIMK1P53667 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.83■□□□□ 0.93
LIMK1P53667 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.83■□□□□ 0.93
LIMK1P53667 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.83■□□□□ 0.93
LIMK1P53667 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIMK1P53667 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LIMK1P53667 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
LIMK1P53667 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.83■□□□□ 0.92
LIMK1P53667 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LIMK1P53667 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LIMK1P53667 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LIMK1P53667 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.82■□□□□ 0.92
LIMK1P53667 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LIMK1P53667 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LIMK1P53667 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LIMK1P53667 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.82■□□□□ 0.92
LIMK1P53667 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.82■□□□□ 0.92
LIMK1P53667 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.82■□□□□ 0.92
LIMK1P53667 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.82■□□□□ 0.92
LIMK1P53667 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
LIMK1P53667 AC233723.2-201ENST00000623798 2106 ntBASIC20.82■□□□□ 0.92
LIMK1P53667 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.82■□□□□ 0.92
LIMK1P53667 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LIMK1P53667 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LIMK1P53667 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.81■□□□□ 0.92
LIMK1P53667 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LIMK1P53667 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LIMK1P53667 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.81■□□□□ 0.92
LIMK1P53667 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LIMK1P53667 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LIMK1P53667 AL353803.4-201ENST00000565882 1934 ntBASIC20.81■□□□□ 0.92
LIMK1P53667 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LIMK1P53667 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
LIMK1P53667 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.81■□□□□ 0.92
LIMK1P53667 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
LIMK1P53667 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.81■□□□□ 0.92
LIMK1P53667 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.81■□□□□ 0.92
LIMK1P53667 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.81■□□□□ 0.92
LIMK1P53667 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LIMK1P53667 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LIMK1P53667 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.81■□□□□ 0.92
LIMK1P53667 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LIMK1P53667 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.81■□□□□ 0.92
LIMK1P53667 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
LIMK1P53667 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LIMK1P53667 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LIMK1P53667 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LIMK1P53667 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LIMK1P53667 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LIMK1P53667 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LIMK1P53667 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LIMK1P53667 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.8■□□□□ 0.92
LIMK1P53667 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.8■□□□□ 0.92
LIMK1P53667 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.8■□□□□ 0.92
LIMK1P53667 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.8■□□□□ 0.92
LIMK1P53667 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms