Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 YOR238WYOR238W 912 nt3.24□□□□□ -1.89
RPT4P53549 YPR053CYPR053C 456 nt3.24□□□□□ -1.89
RPT4P53549 SHG1YBR258C 429 nt3.24□□□□□ -1.89
RPT4P53549 IRC3YDR332W 2070 nt3.24□□□□□ -1.89
RPT4P53549 PFK26YIL107C 2484 nt3.24□□□□□ -1.89
RPT4P53549 YHR078WYHR078W 1659 nt3.24□□□□□ -1.89
RPT4P53549 RTG3YBL103C 1461 nt3.23□□□□□ -1.89
RPT4P53549 AI3Q0060 1248 nt3.23□□□□□ -1.89
RPT4P53549 RPS23AYGR118W 438 nt3.23□□□□□ -1.89
RPT4P53549 tR(UCU)Q1tR(UCU)Q1 73 nt3.23□□□□□ -1.89
RPT4P53549 RFA3YJL173C 369 nt3.23□□□□□ -1.89
RPT4P53549 NNF1YJR112W 606 nt3.23□□□□□ -1.89
RPT4P53549 YLR257WYLR257W 966 nt3.23□□□□□ -1.89
RPT4P53549 DLT1YMR126C 1029 nt3.23□□□□□ -1.89
RPT4P53549 AAR2YBL074C 1068 nt3.23□□□□□ -1.89
RPT4P53549 VAM10YOR068C 345 nt3.23□□□□□ -1.89
RPT4P53549 HAT1YPL001W 1125 nt3.23□□□□□ -1.89
RPT4P53549 RPS23BYPR132W 438 nt3.23□□□□□ -1.89
RPT4P53549 YPL150WYPL150W 2706 nt3.22□□□□□ -1.89
RPT4P53549 RPN3YER021W 1572 nt3.22□□□□□ -1.89
RPT4P53549 YCR100CYCR100C 951 nt3.22□□□□□ -1.89
RPT4P53549 ARF1YDL192W 546 nt3.22□□□□□ -1.89
RPT4P53549 PEX10YDR265W 1014 nt3.22□□□□□ -1.89
RPT4P53549 YER039C-AYER039C-A 219 nt3.22□□□□□ -1.89
RPT4P53549 YKR070WYKR070W 1059 nt3.22□□□□□ -1.89
RPT4P53549 JIP3YLR331C 378 nt3.22□□□□□ -1.89
RPT4P53549 RPN13YLR421C 471 nt3.22□□□□□ -1.89
RPT4P53549 YNL226WYNL226W 411 nt3.22□□□□□ -1.89
RPT4P53549 RPS7AYOR096W 573 nt3.22□□□□□ -1.89
RPT4P53549 YBR116CYBR116C 528 nt3.22□□□□□ -1.89
RPT4P53549 VBA4YDR119W 2307 nt3.22□□□□□ -1.89
RPT4P53549 SPT14YPL175W 1359 nt3.22□□□□□ -1.89
RPT4P53549 ENP2YGR145W 2124 nt3.22□□□□□ -1.89
RPT4P53549 CIN1YOR349W 3045 nt3.22□□□□□ -1.89
RPT4P53549 ERG9YHR190W 1335 nt3.21□□□□□ -1.89
RPT4P53549 AYT1YLL063C 1425 nt3.21□□□□□ -1.9
RPT4P53549 YDL157CYDL157C 357 nt3.21□□□□□ -1.9
RPT4P53549 YDR320W-BYDR320W-B 138 nt3.21□□□□□ -1.9
RPT4P53549 ERG25YGR060W 930 nt3.21□□□□□ -1.9
RPT4P53549 SVP26YHR181W 687 nt3.21□□□□□ -1.9
RPT4P53549 RNR2YJL026W 1200 nt3.21□□□□□ -1.9
RPT4P53549 RPS28BYLR264W 204 nt3.21□□□□□ -1.9
RPT4P53549 YBL055CYBL055C 1257 nt3.21□□□□□ -1.9
RPT4P53549 YOR062CYOR062C 807 nt3.21□□□□□ -1.9
RPT4P53549 HSE1YHL002W 1359 nt3.21□□□□□ -1.9
RPT4P53549 YSP2YDR326C 4317 nt3.2□□□□□ -1.9
RPT4P53549 SAD1YFR005C 1347 nt3.2□□□□□ -1.9
RPT4P53549 YDL242WYDL242W 354 nt3.2□□□□□ -1.9
RPT4P53549 RUB1YDR139C 234 nt3.2□□□□□ -1.9
RPT4P53549 YFL065CYFL065C 309 nt3.2□□□□□ -1.9
RPT4P53549 UPF3YGR072W 1164 nt3.2□□□□□ -1.9
RPT4P53549 YKL156C-AYKL156C-A 117 nt3.2□□□□□ -1.9
RPT4P53549 SPC2YML055W 537 nt3.2□□□□□ -1.9
RPT4P53549 RHO5YNL180C 996 nt3.2□□□□□ -1.9
RPT4P53549 YNL184CYNL184C 327 nt3.2□□□□□ -1.9
RPT4P53549 RPL23AYBL087C 414 nt3.2□□□□□ -1.9
RPT4P53549 YOR366WYOR366W 354 nt3.2□□□□□ -1.9
RPT4P53549 PEX34YCL056C 435 nt3.2□□□□□ -1.9
RPT4P53549 YDR186CYDR186C 2634 nt3.2□□□□□ -1.9
RPT4P53549 NDC80YIL144W 2076 nt3.2□□□□□ -1.9
RPT4P53549 APC5YOR249C 2058 nt3.2□□□□□ -1.9
RPT4P53549 NEW1YPL226W 3591 nt3.19□□□□□ -1.9
RPT4P53549 YAK1YJL141C 2424 nt3.19□□□□□ -1.9
RPT4P53549 COBQ0105 1158 nt3.19□□□□□ -1.9
RPT4P53549 AIM11YER093C-A 414 nt3.19□□□□□ -1.9
RPT4P53549 SRT1YMR101C 1032 nt3.19□□□□□ -1.9
RPT4P53549 YOR097CYOR097C 528 nt3.19□□□□□ -1.9
RPT4P53549 YOR385WYOR385W 873 nt3.19□□□□□ -1.9
RPT4P53549 TCB2YNL087W 3537 nt3.18□□□□□ -1.9
RPT4P53549 MYO5YMR109W 3660 nt3.18□□□□□ -1.9
RPT4P53549 BMS1YPL217C 3552 nt3.18□□□□□ -1.9
RPT4P53549 SRB7YDR308C 423 nt3.18□□□□□ -1.9
RPT4P53549 MFA1YDR461W 111 nt3.18□□□□□ -1.9
RPT4P53549 THO1YER063W 657 nt3.18□□□□□ -1.9
RPT4P53549 YFR057WYFR057W 456 nt3.18□□□□□ -1.9
RPT4P53549 YGR073CYGR073C 372 nt3.18□□□□□ -1.9
RPT4P53549 YLR366WYLR366W 306 nt3.18□□□□□ -1.9
RPT4P53549 HHF2YNL030W 312 nt3.18□□□□□ -1.9
RPT4P53549 MIC27YNL100W 705 nt3.18□□□□□ -1.9
RPT4P53549 YNL319WYNL319W 441 nt3.18□□□□□ -1.9
RPT4P53549 MCA1YOR197W 1299 nt3.18□□□□□ -1.9
RPT4P53549 YPL135C-AYPL135C-A 174 nt3.18□□□□□ -1.9
RPT4P53549 PPT2YPL148C 522 nt3.18□□□□□ -1.9
RPT4P53549 VPS41YDR080W 2979 nt3.18□□□□□ -1.9
RPT4P53549 SLP1YOR154W 1764 nt3.17□□□□□ -1.9
RPT4P53549 NMA111YNL123W 2994 nt3.17□□□□□ -1.9
RPT4P53549 snR68snR68 136 nt3.17□□□□□ -1.9
RPT4P53549 SMX2YFL017W-A 234 nt3.17□□□□□ -1.9
RPT4P53549 ECO1YFR027W 846 nt3.17□□□□□ -1.9
RPT4P53549 OST5YGL226C-A 261 nt3.17□□□□□ -1.9
RPT4P53549 VMA7YGR020C 357 nt3.17□□□□□ -1.9
RPT4P53549 QCR10YHR001W-A 234 nt3.17□□□□□ -1.9
RPT4P53549 PEX18YHR160C 852 nt3.17□□□□□ -1.9
RPT4P53549 YAP5YIR018W 738 nt3.17□□□□□ -1.9
RPT4P53549 YIR040CYIR040C 333 nt3.17□□□□□ -1.9
RPT4P53549 YAL066WYAL066W 309 nt3.17□□□□□ -1.9
RPT4P53549 YLR169WYLR169W 354 nt3.17□□□□□ -1.9
RPT4P53549 YOL106WYOL106W 354 nt3.17□□□□□ -1.9
RPT4P53549 SRL1YOR247W 633 nt3.17□□□□□ -1.9
RPT4P53549 YOR283WYOR283W 693 nt3.17□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 35.4 ms