Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CLK3P49761 IRS3P-201ENST00000223076 1006 ntBASIC19.84■□□□□ 0.77
CLK3P49761 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK3P49761 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK3P49761 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.84■□□□□ 0.77
CLK3P49761 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.84■□□□□ 0.77
CLK3P49761 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 LINC01521-201ENST00000504184 1943 ntBASIC19.84■□□□□ 0.77
CLK3P49761 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK3P49761 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK3P49761 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.83■□□□□ 0.77
CLK3P49761 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLK3P49761 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.83■□□□□ 0.77
CLK3P49761 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLK3P49761 AL034346.1-201ENST00000568244 1277 ntBASIC19.83■□□□□ 0.77
CLK3P49761 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CLK3P49761 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK3P49761 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK3P49761 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.83■□□□□ 0.76
CLK3P49761 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLK3P49761 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.83■□□□□ 0.76
CLK3P49761 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK3P49761 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.76
CLK3P49761 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLK3P49761 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CLK3P49761 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.83■□□□□ 0.76
CLK3P49761 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK3P49761 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK3P49761 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLK3P49761 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.82■□□□□ 0.76
CLK3P49761 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.82■□□□□ 0.76
CLK3P49761 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CLK3P49761 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.82■□□□□ 0.76
CLK3P49761 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
CLK3P49761 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.82■□□□□ 0.76
CLK3P49761 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.82■□□□□ 0.76
CLK3P49761 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.82■□□□□ 0.76
CLK3P49761 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.82■□□□□ 0.76
CLK3P49761 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.82■□□□□ 0.76
CLK3P49761 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK3P49761 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK3P49761 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK3P49761 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK3P49761 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK3P49761 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLK3P49761 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.81■□□□□ 0.76
CLK3P49761 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.81■□□□□ 0.76
CLK3P49761 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLK3P49761 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.81■□□□□ 0.76
CLK3P49761 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.81■□□□□ 0.76
CLK3P49761 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLK3P49761 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.81■□□□□ 0.76
CLK3P49761 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK3P49761 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CLK3P49761 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLK3P49761 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLK3P49761 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK3P49761 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLK3P49761 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLK3P49761 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK3P49761 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK3P49761 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CLK3P49761 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.8■□□□□ 0.76
CLK3P49761 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK3P49761 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK3P49761 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.8■□□□□ 0.76
CLK3P49761 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK3P49761 AL354811.1-201ENST00000610286 706 ntBASIC19.8■□□□□ 0.76
CLK3P49761 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK3P49761 AL358852.1-201ENST00000623174 1268 ntBASIC19.8■□□□□ 0.76
CLK3P49761 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK3P49761 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLK3P49761 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLK3P49761 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK3P49761 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.79■□□□□ 0.76
CLK3P49761 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CLK3P49761 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.79■□□□□ 0.76
CLK3P49761 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLK3P49761 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK3P49761 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CLK3P49761 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.79■□□□□ 0.76
CLK3P49761 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms