Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS3P49746 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS3P49746 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS3P49746 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS3P49746 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS3P49746 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
THBS3P49746 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
THBS3P49746 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.32■□□□□ 0.36
THBS3P49746 AC008764.7-201ENST00000593779 1081 ntBASIC17.32■□□□□ 0.36
THBS3P49746 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.32■□□□□ 0.36
THBS3P49746 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
THBS3P49746 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.32■□□□□ 0.36
THBS3P49746 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.32■□□□□ 0.36
THBS3P49746 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
THBS3P49746 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
THBS3P49746 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.31■□□□□ 0.36
THBS3P49746 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.31■□□□□ 0.36
THBS3P49746 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
THBS3P49746 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS3P49746 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.31■□□□□ 0.36
THBS3P49746 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.31■□□□□ 0.36
THBS3P49746 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.31■□□□□ 0.36
THBS3P49746 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS3P49746 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS3P49746 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS3P49746 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.31■□□□□ 0.36
THBS3P49746 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.31■□□□□ 0.36
THBS3P49746 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS3P49746 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THBS3P49746 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.31■□□□□ 0.36
THBS3P49746 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THBS3P49746 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS3P49746 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THBS3P49746 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.3■□□□□ 0.36
THBS3P49746 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS3P49746 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
THBS3P49746 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
THBS3P49746 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS3P49746 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS3P49746 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THBS3P49746 AC099791.1-201ENST00000416440 715 ntBASIC17.3■□□□□ 0.36
THBS3P49746 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THBS3P49746 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS3P49746 AC233992.3-201ENST00000607491 485 ntBASIC17.3■□□□□ 0.36
THBS3P49746 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS3P49746 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.3■□□□□ 0.36
THBS3P49746 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS3P49746 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS3P49746 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS3P49746 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS3P49746 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS3P49746 AC026271.2-201ENST00000428091 497 ntBASIC17.29■□□□□ 0.36
THBS3P49746 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS3P49746 AC126544.1-201ENST00000580842 1059 ntBASIC17.29■□□□□ 0.36
THBS3P49746 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS3P49746 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS3P49746 FEM1AP4-201ENST00000443167 1987 ntBASIC17.29■□□□□ 0.36
THBS3P49746 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS3P49746 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS3P49746 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 AP006587.3-201ENST00000525742 1516 ntBASIC17.28■□□□□ 0.36
THBS3P49746 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.28■□□□□ 0.36
THBS3P49746 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.28■□□□□ 0.36
THBS3P49746 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.28■□□□□ 0.36
THBS3P49746 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS3P49746 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
THBS3P49746 AC003102.1-202ENST00000563394 1796 ntBASIC17.28■□□□□ 0.36
THBS3P49746 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.28■□□□□ 0.36
THBS3P49746 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
THBS3P49746 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS3P49746 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.27■□□□□ 0.36
THBS3P49746 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS3P49746 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
THBS3P49746 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
THBS3P49746 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS3P49746 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.27■□□□□ 0.36
THBS3P49746 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS3P49746 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.27■□□□□ 0.36
THBS3P49746 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.27■□□□□ 0.36
THBS3P49746 SMUG1P1-201ENST00000590640 811 ntBASIC17.27■□□□□ 0.36
THBS3P49746 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THBS3P49746 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THBS3P49746 AC005229.4-201ENST00000610085 2198 ntBASIC17.27■□□□□ 0.36
THBS3P49746 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
THBS3P49746 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.27■□□□□ 0.36
THBS3P49746 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms