Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC34P49427 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.55■□□□□ 0.24
CDC34P49427 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC34P49427 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.55■□□□□ 0.24
CDC34P49427 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC34P49427 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.55■□□□□ 0.24
CDC34P49427 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDC34P49427 AL499627.2-201ENST00000606283 725 ntBASIC16.55■□□□□ 0.24
CDC34P49427 AC137630.3-201ENST00000607245 391 ntBASIC16.55■□□□□ 0.24
CDC34P49427 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC34P49427 AL391422.3-201ENST00000603791 2761 ntBASIC16.55■□□□□ 0.24
CDC34P49427 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CDC34P49427 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.55■□□□□ 0.24
CDC34P49427 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDC34P49427 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDC34P49427 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.54■□□□□ 0.24
CDC34P49427 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDC34P49427 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDC34P49427 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CDC34P49427 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC34P49427 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC34P49427 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDC34P49427 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDC34P49427 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CDC34P49427 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDC34P49427 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CDC34P49427 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDC34P49427 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDC34P49427 PCDHAC2-203ENST00000615316 3011 ntBASIC16.54■□□□□ 0.24
CDC34P49427 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDC34P49427 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.53■□□□□ 0.24
CDC34P49427 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDC34P49427 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC34P49427 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC34P49427 MIR4508-201ENST00000584178 70 ntBASIC16.53■□□□□ 0.24
CDC34P49427 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.53■□□□□ 0.24
CDC34P49427 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.53■□□□□ 0.24
CDC34P49427 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.53■□□□□ 0.24
CDC34P49427 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC34P49427 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC34P49427 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDC34P49427 AFG3L1P-217ENST00000557444 2447 ntBASIC16.53■□□□□ 0.24
CDC34P49427 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDC34P49427 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDC34P49427 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.52■□□□□ 0.24
CDC34P49427 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.52■□□□□ 0.24
CDC34P49427 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.52■□□□□ 0.24
CDC34P49427 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.52■□□□□ 0.24
CDC34P49427 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.52■□□□□ 0.24
CDC34P49427 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.52■□□□□ 0.24
CDC34P49427 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDC34P49427 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CDC34P49427 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.52■□□□□ 0.24
CDC34P49427 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.52■□□□□ 0.24
CDC34P49427 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDC34P49427 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDC34P49427 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
CDC34P49427 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
CDC34P49427 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CDC34P49427 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.52■□□□□ 0.23
CDC34P49427 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDC34P49427 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.52■□□□□ 0.23
CDC34P49427 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDC34P49427 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.52■□□□□ 0.23
CDC34P49427 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDC34P49427 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDC34P49427 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.52■□□□□ 0.23
CDC34P49427 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC34P49427 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC34P49427 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC34P49427 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CDC34P49427 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDC34P49427 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC34P49427 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC34P49427 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDC34P49427 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC34P49427 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms