Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC1A6P48664 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC1A6P48664 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SLC1A6P48664 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A6P48664 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.64■□□□□ 0.9
SLC1A6P48664 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC1A6P48664 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC1A6P48664 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SLC1A6P48664 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC1A6P48664 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC1A6P48664 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLC1A6P48664 AP006587.3-201ENST00000525742 1516 ntBASIC20.64■□□□□ 0.9
SLC1A6P48664 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A6P48664 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A6P48664 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLC1A6P48664 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.64■□□□□ 0.89
SLC1A6P48664 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC1A6P48664 AC092171.4-201ENST00000609130 632 ntBASIC20.64■□□□□ 0.89
SLC1A6P48664 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC1A6P48664 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC1A6P48664 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A6P48664 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A6P48664 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLC1A6P48664 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC1A6P48664 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC1A6P48664 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A6P48664 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC1A6P48664 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.63■□□□□ 0.89
SLC1A6P48664 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.63■□□□□ 0.89
SLC1A6P48664 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC1A6P48664 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A6P48664 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A6P48664 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC1A6P48664 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC1A6P48664 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A6P48664 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A6P48664 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A6P48664 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A6P48664 SRD5A1P1-201ENST00000442297 786 ntBASIC20.62■□□□□ 0.89
SLC1A6P48664 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC1A6P48664 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A6P48664 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A6P48664 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A6P48664 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
SLC1A6P48664 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A6P48664 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A6P48664 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC1A6P48664 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLC1A6P48664 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SLC1A6P48664 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A6P48664 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A6P48664 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A6P48664 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A6P48664 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A6P48664 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC1A6P48664 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SLC1A6P48664 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A6P48664 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A6P48664 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC1A6P48664 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SLC1A6P48664 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A6P48664 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SLC1A6P48664 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SLC1A6P48664 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A6P48664 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A6P48664 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC1A6P48664 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SLC1A6P48664 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC1A6P48664 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC1A6P48664 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SLC1A6P48664 MIR3621-201ENST00000580529 85 ntBASIC20.6■□□□□ 0.89
SLC1A6P48664 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC1A6P48664 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC1A6P48664 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC1A6P48664 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC1A6P48664 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A6P48664 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A6P48664 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms