Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRGP48443 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
RXRGP48443 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RXRGP48443 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.96■□□□□ 0.95
RXRGP48443 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.96■□□□□ 0.95
RXRGP48443 AC053503.5-201ENST00000601508 636 ntBASIC20.96■□□□□ 0.95
RXRGP48443 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RXRGP48443 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RXRGP48443 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRGP48443 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RXRGP48443 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.95■□□□□ 0.94
RXRGP48443 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.95■□□□□ 0.94
RXRGP48443 AC069152.1-201ENST00000438030 544 ntBASIC20.95■□□□□ 0.94
RXRGP48443 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RXRGP48443 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RXRGP48443 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RXRGP48443 AC013268.1-206ENST00000638368 961 ntBASIC20.95■□□□□ 0.94
RXRGP48443 AC112229.1-201ENST00000639295 961 ntBASIC20.95■□□□□ 0.94
RXRGP48443 AC133041.1-202ENST00000642053 222 ntBASIC20.95■□□□□ 0.94
RXRGP48443 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
RXRGP48443 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RXRGP48443 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RXRGP48443 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RXRGP48443 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RXRGP48443 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RXRGP48443 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRGP48443 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.94■□□□□ 0.94
RXRGP48443 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.94■□□□□ 0.94
RXRGP48443 TERF1P5-201ENST00000477545 1207 ntBASIC20.94■□□□□ 0.94
RXRGP48443 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RXRGP48443 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRGP48443 AC105036.2-201ENST00000569468 176 ntBASIC20.94■□□□□ 0.94
RXRGP48443 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.94■□□□□ 0.94
RXRGP48443 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.94■□□□□ 0.94
RXRGP48443 AC242852.2-201ENST00000615738 1807 ntBASIC20.94■□□□□ 0.94
RXRGP48443 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RXRGP48443 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRGP48443 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.94■□□□□ 0.94
RXRGP48443 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRGP48443 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RXRGP48443 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.93■□□□□ 0.94
RXRGP48443 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRGP48443 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRGP48443 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
RXRGP48443 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRGP48443 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRGP48443 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RXRGP48443 TSPY20P-201ENST00000450910 630 ntBASIC20.93■□□□□ 0.94
RXRGP48443 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.93■□□□□ 0.94
RXRGP48443 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.93■□□□□ 0.94
RXRGP48443 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.93■□□□□ 0.94
RXRGP48443 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RXRGP48443 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.93■□□□□ 0.94
RXRGP48443 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRGP48443 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRGP48443 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRGP48443 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.93■□□□□ 0.94
RXRGP48443 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RXRGP48443 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RXRGP48443 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RXRGP48443 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.92■□□□□ 0.94
RXRGP48443 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
RXRGP48443 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RXRGP48443 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.92■□□□□ 0.94
RXRGP48443 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RXRGP48443 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RXRGP48443 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RXRGP48443 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.92■□□□□ 0.94
RXRGP48443 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RXRGP48443 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RXRGP48443 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.91■□□□□ 0.94
RXRGP48443 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRGP48443 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRGP48443 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RXRGP48443 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRGP48443 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRGP48443 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.91■□□□□ 0.94
RXRGP48443 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRGP48443 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RXRGP48443 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRGP48443 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRGP48443 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RXRGP48443 AC007322.4-201ENST00000509611 723 ntBASIC20.91■□□□□ 0.94
RXRGP48443 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms