Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	APL4	YPR029C	2499 nt		3.94	□□□□□ -1.78
CAF16	P43569	MNN4	YKL201C	3537 nt		3.94	□□□□□ -1.78
CAF16	P43569	IMD4	YML056C	1575 nt		3.93	□□□□□ -1.78
CAF16	P43569	RIM13	YMR154C	2184 nt		3.93	□□□□□ -1.78
CAF16	P43569	NCS2	YNL119W	1482 nt		3.93	□□□□□ -1.78
CAF16	P43569	VID28	YIL017C	2766 nt		3.93	□□□□□ -1.78
CAF16	P43569	POL4	YCR014C	1749 nt		3.93	□□□□□ -1.78
CAF16	P43569	AVT5	YBL089W	1380 nt		3.93	□□□□□ -1.78
CAF16	P43569	PER1	YCR044C	1074 nt		3.93	□□□□□ -1.78
CAF16	P43569	FMN1	YDR236C	657 nt		3.93	□□□□□ -1.78
CAF16	P43569	GRX2	YDR513W	432 nt		3.93	□□□□□ -1.78
CAF16	P43569	PUG1	YER185W	912 nt		3.93	□□□□□ -1.78
CAF16	P43569	MIC19	YFR011C	513 nt		3.93	□□□□□ -1.78
CAF16	P43569	COX13	YGL191W	390 nt		3.93	□□□□□ -1.78
CAF16	P43569	YGR161W-C	YGR161W-C	279 nt		3.93	□□□□□ -1.78
CAF16	P43569	PAU13	YHL046C	363 nt		3.93	□□□□□ -1.78
CAF16	P43569	YHR130C	YHR130C	336 nt		3.93	□□□□□ -1.78
CAF16	P43569	YAL047W-A	YAL047W-A	330 nt		3.93	□□□□□ -1.78
CAF16	P43569	YMR052C-A	YMR052C-A	366 nt		3.93	□□□□□ -1.78
CAF16	P43569	YBL039W-B	YBL039W-B	180 nt		3.93	□□□□□ -1.78
CAF16	P43569	UBP16	YPL072W	1500 nt		3.93	□□□□□ -1.78
CAF16	P43569	GSC2	YGR032W	5688 nt		3.93	□□□□□ -1.78
CAF16	P43569	STI1	YOR027W	1770 nt		3.93	□□□□□ -1.78
CAF16	P43569	ARG5,6	YER069W	2592 nt		3.93	□□□□□ -1.78
CAF16	P43569	snR59	snR59	78 nt		3.92	□□□□□ -1.78
CAF16	P43569	PPH3	YDR075W	927 nt		3.92	□□□□□ -1.78
CAF16	P43569	YDR134C	YDR134C	411 nt		3.92	□□□□□ -1.78
CAF16	P43569	RPL11B	YGR085C	525 nt		3.92	□□□□□ -1.78
CAF16	P43569	MVB12	YGR206W	306 nt		3.92	□□□□□ -1.78
CAF16	P43569	MTM1	YGR257C	1101 nt		3.92	□□□□□ -1.78
CAF16	P43569	YIR020C	YIR020C	303 nt		3.92	□□□□□ -1.78
CAF16	P43569	ENV10	YLR065C	546 nt		3.92	□□□□□ -1.78
CAF16	P43569	YLR171W	YLR171W	390 nt		3.92	□□□□□ -1.78
CAF16	P43569	IMP1	YMR150C	573 nt		3.92	□□□□□ -1.78
CAF16	P43569	IGO1	YNL157W	507 nt		3.92	□□□□□ -1.78
CAF16	P43569	RCL1	YOL010W	1104 nt		3.92	□□□□□ -1.78
CAF16	P43569	FYV12	YOR183W	390 nt		3.92	□□□□□ -1.78
CAF16	P43569	RPL11A	YPR102C	525 nt		3.92	□□□□□ -1.78
CAF16	P43569	CPA2	YJR109C	3357 nt		3.92	□□□□□ -1.78
CAF16	P43569	SEC6	YIL068C	2418 nt		3.92	□□□□□ -1.78
CAF16	P43569	ARP4	YJL081C	1470 nt		3.92	□□□□□ -1.78
CAF16	P43569	SRP68	YPL243W	1800 nt		3.91	□□□□□ -1.78
CAF16	P43569	ARF1	YDL192W	546 nt		3.91	□□□□□ -1.78
CAF16	P43569	SPT2	YER161C	1002 nt		3.91	□□□□□ -1.78
CAF16	P43569	YGL194C-A	YGL194C-A	243 nt		3.91	□□□□□ -1.78
CAF16	P43569	YIR036W-A	YIR036W-A	402 nt		3.91	□□□□□ -1.78
CAF16	P43569	YKL063C	YKL063C	504 nt		3.91	□□□□□ -1.78
CAF16	P43569	YLR177W	YLR177W	1887 nt		3.91	□□□□□ -1.78
CAF16	P43569	YLR224W	YLR224W	1110 nt		3.91	□□□□□ -1.78
CAF16	P43569	PDP3	YLR455W	915 nt		3.91	□□□□□ -1.78
CAF16	P43569	DYN3	YMR299C	939 nt		3.91	□□□□□ -1.78
CAF16	P43569	YNL046W	YNL046W	519 nt		3.91	□□□□□ -1.78
CAF16	P43569	TOM22	YNL131W	459 nt		3.91	□□□□□ -1.78
CAF16	P43569	LDS2	YOL047C	1071 nt		3.91	□□□□□ -1.78
CAF16	P43569	YPL088W	YPL088W	1029 nt		3.91	□□□□□ -1.78
CAF16	P43569	YPL261C	YPL261C	309 nt		3.91	□□□□□ -1.78
CAF16	P43569	LTP1	YPR073C	486 nt		3.91	□□□□□ -1.78
CAF16	P43569	SRO7	YPR032W	3102 nt		3.91	□□□□□ -1.78
CAF16	P43569	YBR259W	YBR259W	2067 nt		3.91	□□□□□ -1.78
CAF16	P43569	TIF4631	YGR162W	2859 nt		3.91	□□□□□ -1.78
CAF16	P43569	YDR089W	YDR089W	2610 nt		3.91	□□□□□ -1.78
CAF16	P43569	MNL1	YHR204W	2391 nt		3.9	□□□□□ -1.78
CAF16	P43569	SHE4	YOR035C	2370 nt		3.9	□□□□□ -1.78
CAF16	P43569	YJL132W	YJL132W	2253 nt		3.9	□□□□□ -1.79
CAF16	P43569	YDL032W	YDL032W	312 nt		3.9	□□□□□ -1.79
CAF16	P43569	HNT1	YDL125C	477 nt		3.9	□□□□□ -1.79
CAF16	P43569	THI13	YDL244W	1023 nt		3.9	□□□□□ -1.79
CAF16	P43569	YDR114C	YDR114C	303 nt		3.9	□□□□□ -1.79
CAF16	P43569	YHL046W-A	YHL046W-A	327 nt		3.9	□□□□□ -1.79
CAF16	P43569	RAD27	YKL113C	1149 nt		3.9	□□□□□ -1.79
CAF16	P43569	SDO1	YLR022C	753 nt		3.9	□□□□□ -1.79
CAF16	P43569	AFB1	YLR040C	675 nt		3.9	□□□□□ -1.79
CAF16	P43569	PBI2	YNL015W	228 nt		3.9	□□□□□ -1.79
CAF16	P43569	YBR051W	YBR051W	351 nt		3.9	□□□□□ -1.79
CAF16	P43569	HSP26	YBR072W	645 nt		3.9	□□□□□ -1.79
CAF16	P43569	YPS6	YIR039C	1614 nt		3.9	□□□□□ -1.79
CAF16	P43569	RRP3	YHR065C	1506 nt		3.9	□□□□□ -1.79
CAF16	P43569	TRK1	YJL129C	3708 nt		3.9	□□□□□ -1.79
CAF16	P43569	KAR9	YPL269W	1935 nt		3.89	□□□□□ -1.79
CAF16	P43569	SNF2	YOR290C	5112 nt		3.89	□□□□□ -1.79
CAF16	P43569	BNA7	YDR428C	786 nt		3.89	□□□□□ -1.79
CAF16	P43569	POG1	YIL122W	1056 nt		3.89	□□□□□ -1.79
CAF16	P43569	PRM10	YJL108C	1152 nt		3.89	□□□□□ -1.79
CAF16	P43569	SOP4	YJL192C	705 nt		3.89	□□□□□ -1.79
CAF16	P43569	GTT2	YLL060C	702 nt		3.89	□□□□□ -1.79
CAF16	P43569	GPI15	YNL038W	690 nt		3.89	□□□□□ -1.79
CAF16	P43569	RPL16B	YNL069C	597 nt		3.89	□□□□□ -1.79
CAF16	P43569	YPL025C	YPL025C	558 nt		3.89	□□□□□ -1.79
CAF16	P43569	snR17a	snR17a	333 nt		3.89	□□□□□ -1.79
CAF16	P43569	KIP3	YGL216W	2418 nt		3.88	□□□□□ -1.79
CAF16	P43569	snR7-S	snR7-S	179 nt		3.88	□□□□□ -1.79
CAF16	P43569	YDR537C	YDR537C	606 nt		3.88	□□□□□ -1.79
CAF16	P43569	AGA2	YGL032C	264 nt		3.88	□□□□□ -1.79
CAF16	P43569	YGR039W	YGR039W	312 nt		3.88	□□□□□ -1.79
CAF16	P43569	YHL026C	YHL026C	948 nt		3.88	□□□□□ -1.79
CAF16	P43569	YJL086C	YJL086C	369 nt		3.88	□□□□□ -1.79
CAF16	P43569	YBL006W-A	YBL006W-A	150 nt		3.88	□□□□□ -1.79
CAF16	P43569	AIM36	YMR157C	768 nt		3.88	□□□□□ -1.79
CAF16	P43569	SVS1	YPL163C	783 nt		3.88	□□□□□ -1.79
CAF16	P43569	FAR8	YMR029C	1572 nt		3.88	□□□□□ -1.79

Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms