Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 tW(CCA)MtW(CCA)M 72 nt2.59□□□□□ -1.99
LDB7P38210 tW(CCA)PtW(CCA)P 72 nt2.59□□□□□ -1.99
LDB7P38210 YJR020WYJR020W 333 nt2.59□□□□□ -1.99
LDB7P38210 LSM8YJR022W 330 nt2.59□□□□□ -1.99
LDB7P38210 POP8YBL018C 402 nt2.59□□□□□ -1.99
LDB7P38210 RPL23AYBL087C 414 nt2.59□□□□□ -1.99
LDB7P38210 YOL114CYOL114C 609 nt2.59□□□□□ -1.99
LDB7P38210 MCT1YOR221C 1083 nt2.59□□□□□ -1.99
LDB7P38210 SSP2YOR242C 1116 nt2.59□□□□□ -1.99
LDB7P38210 snR34snR34 203 nt2.59□□□□□ -1.99
LDB7P38210 YJL132WYJL132W 2253 nt2.59□□□□□ -1.99
LDB7P38210 ESL1YIL151C 3357 nt2.59□□□□□ -2
LDB7P38210 UTP14YML093W 2700 nt2.59□□□□□ -2
LDB7P38210 CWC22YGR278W 1734 nt2.59□□□□□ -2
LDB7P38210 CAF120YNL278W 3183 nt2.59□□□□□ -2
LDB7P38210 MAK5YBR142W 2322 nt2.58□□□□□ -2
LDB7P38210 PRP18YGR006W 756 nt2.58□□□□□ -2
LDB7P38210 RPS25AYGR027C 327 nt2.58□□□□□ -2
LDB7P38210 ATG5YPL149W 885 nt2.58□□□□□ -2
LDB7P38210 RTT10YPL183C 3042 nt2.58□□□□□ -2
LDB7P38210 ESL2YKR096W 3588 nt2.58□□□□□ -2
LDB7P38210 INP52YNL106C 3552 nt2.58□□□□□ -2
LDB7P38210 AVT5YBL089W 1380 nt2.58□□□□□ -2
LDB7P38210 BNA4YBL098W 1383 nt2.58□□□□□ -2
LDB7P38210 CYR1YJL005W 6081 nt2.58□□□□□ -2
LDB7P38210 GIN4YDR507C 3429 nt2.57□□□□□ -2
LDB7P38210 YHL045WYHL045W 348 nt2.57□□□□□ -2
LDB7P38210 RGI2YIL057C 495 nt2.57□□□□□ -2
LDB7P38210 ERV41YML067C 1059 nt2.57□□□□□ -2
LDB7P38210 TPT1YOL102C 693 nt2.57□□□□□ -2
LDB7P38210 THI80YOR143C 960 nt2.57□□□□□ -2
LDB7P38210 YPR203WYPR203W 309 nt2.57□□□□□ -2
LDB7P38210 JSN1YJR091C 3276 nt2.57□□□□□ -2
LDB7P38210 SWC4YGR002C 1431 nt2.57□□□□□ -2
LDB7P38210 MSH4YFL003C 2637 nt2.56□□□□□ -2
LDB7P38210 PTP3YER075C 2787 nt2.56□□□□□ -2
LDB7P38210 HAA1YPR008W 2085 nt2.56□□□□□ -2
LDB7P38210 YDR535CYDR535C 501 nt2.56□□□□□ -2
LDB7P38210 YFR010W-AYFR010W-A 189 nt2.56□□□□□ -2
LDB7P38210 KEG1YFR042W 603 nt2.56□□□□□ -2
LDB7P38210 YHR032W-AYHR032W-A 180 nt2.56□□□□□ -2
LDB7P38210 PEX18YHR160C 852 nt2.56□□□□□ -2
LDB7P38210 YHR214C-DYHR214C-D 294 nt2.56□□□□□ -2
LDB7P38210 YIL054WYIL054W 318 nt2.56□□□□□ -2
LDB7P38210 YAR069CYAR069C 294 nt2.56□□□□□ -2
LDB7P38210 LTP1YPR073C 486 nt2.56□□□□□ -2
LDB7P38210 YPR142CYPR142C 564 nt2.56□□□□□ -2
LDB7P38210 PDR1YGL013C 3207 nt2.55□□□□□ -2
LDB7P38210 snR70snR70 164 nt2.55□□□□□ -2
LDB7P38210 YGL159WYGL159W 1113 nt2.55□□□□□ -2
LDB7P38210 RPL24BYGR148C 468 nt2.55□□□□□ -2
LDB7P38210 CBP2YHL038C 1893 nt2.55□□□□□ -2
LDB7P38210 YHR213WYHR213W 597 nt2.55□□□□□ -2
LDB7P38210 RPA12YJR063W 378 nt2.55□□□□□ -2
LDB7P38210 YKL066WYKL066W 444 nt2.55□□□□□ -2
LDB7P38210 SED5YLR026C 1023 nt2.55□□□□□ -2
LDB7P38210 YAR062WYAR062W 597 nt2.55□□□□□ -2
LDB7P38210 NNT1YLR285W 786 nt2.55□□□□□ -2
LDB7P38210 YLR347W-AYLR347W-A 141 nt2.55□□□□□ -2
LDB7P38210 BET5YML077W 480 nt2.55□□□□□ -2
LDB7P38210 SPO20YMR017W 1194 nt2.55□□□□□ -2
LDB7P38210 YPL071CYPL071C 471 nt2.55□□□□□ -2
LDB7P38210 FKS3YMR306W 5358 nt2.54□□□□□ -2
LDB7P38210 BAT1YHR208W 1182 nt2.54□□□□□ -2
LDB7P38210 MMF1YIL051C 438 nt2.54□□□□□ -2
LDB7P38210 SUB1YMR039C 879 nt2.54□□□□□ -2
LDB7P38210 YMR178WYMR178W 825 nt2.54□□□□□ -2
LDB7P38210 YOR387CYOR387C 621 nt2.54□□□□□ -2
LDB7P38210 YBR201C-AYBR201C-A 204 nt2.54□□□□□ -2
LDB7P38210 SSN2YDR443C 4263 nt2.54□□□□□ -2
LDB7P38210 YBR259WYBR259W 2067 nt2.54□□□□□ -2
LDB7P38210 ADY4YLR227C 1482 nt2.53□□□□□ -2
LDB7P38210 PFF1YBR074W 2931 nt2.53□□□□□ -2
LDB7P38210 URB2YJR041C 3525 nt2.53□□□□□ -2
LDB7P38210 RIF1YBR275C 5751 nt2.53□□□□□ -2
LDB7P38210 PRE1YER012W 597 nt2.53□□□□□ -2
LDB7P38210 RPB8YOR224C 441 nt2.53□□□□□ -2
LDB7P38210 RRD2YPL152W 1077 nt2.53□□□□□ -2
LDB7P38210 SLN1YIL147C 3663 nt2.53□□□□□ -2
LDB7P38210 TOM1YDR457W 9807 nt2.53□□□□□ -2
LDB7P38210 PDR3YBL005W 2931 nt2.52□□□□□ -2.01
LDB7P38210 AVT2YEL064C 1443 nt2.52□□□□□ -2.01
LDB7P38210 SLY41YOR307C 1362 nt2.52□□□□□ -2.01
LDB7P38210 BUB1YGR188C 3066 nt2.52□□□□□ -2.01
LDB7P38210 POL4YCR014C 1749 nt2.52□□□□□ -2.01
LDB7P38210 SPT15YER148W 723 nt2.52□□□□□ -2.01
LDB7P38210 YIR023C-AYIR023C-A 324 nt2.52□□□□□ -2.01
LDB7P38210 INO4YOL108C 456 nt2.52□□□□□ -2.01
LDB7P38210 YOR203WYOR203W 354 nt2.52□□□□□ -2.01
LDB7P38210 GEA1YJR031C 4227 nt2.52□□□□□ -2.01
LDB7P38210 YPP1YGR198W 2454 nt2.52□□□□□ -2.01
LDB7P38210 BOI1YBL085W 2943 nt2.52□□□□□ -2.01
LDB7P38210 SKT5YBL061C 2091 nt2.51□□□□□ -2.01
LDB7P38210 KHA1YJL094C 2622 nt2.51□□□□□ -2.01
LDB7P38210 YHR086W-AYHR086W-A 162 nt2.51□□□□□ -2.01
LDB7P38210 SAW1YAL027W 786 nt2.51□□□□□ -2.01
LDB7P38210 CPR7YJR032W 1182 nt2.51□□□□□ -2.01
LDB7P38210 ARC19YKL013C 516 nt2.51□□□□□ -2.01
LDB7P38210 CDC123YLR215C 1083 nt2.51□□□□□ -2.01
LDB7P38210 YOR020W-AYOR020W-A 273 nt2.51□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 26.4 ms