Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.75■□□□□ 0.91
LAMA1P25391 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LAMA1P25391 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LAMA1P25391 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LAMA1P25391 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.75■□□□□ 0.91
LAMA1P25391 C1QBPP2-201ENST00000528754 825 ntBASIC20.75■□□□□ 0.91
LAMA1P25391 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.75■□□□□ 0.91
LAMA1P25391 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.74■□□□□ 0.91
LAMA1P25391 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LAMA1P25391 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LAMA1P25391 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.74■□□□□ 0.91
LAMA1P25391 BX088651.1-201ENST00000540551 451 ntBASIC20.74■□□□□ 0.91
LAMA1P25391 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LAMA1P25391 KRT16P2-201ENST00000414673 1423 ntBASIC20.74■□□□□ 0.91
LAMA1P25391 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMA1P25391 AC061975.6-201ENST00000579045 1553 ntBASIC20.74■□□□□ 0.91
LAMA1P25391 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMA1P25391 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMA1P25391 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LAMA1P25391 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMA1P25391 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.74■□□□□ 0.91
LAMA1P25391 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.74■□□□□ 0.91
LAMA1P25391 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LAMA1P25391 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
LAMA1P25391 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.74■□□□□ 0.91
LAMA1P25391 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.74■□□□□ 0.91
LAMA1P25391 AL355472.2-201ENST00000422958 438 ntBASIC20.74■□□□□ 0.91
LAMA1P25391 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LAMA1P25391 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LAMA1P25391 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LAMA1P25391 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LAMA1P25391 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LAMA1P25391 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LAMA1P25391 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.73■□□□□ 0.91
LAMA1P25391 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LAMA1P25391 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.73■□□□□ 0.91
LAMA1P25391 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LAMA1P25391 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.73■□□□□ 0.91
LAMA1P25391 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LAMA1P25391 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LAMA1P25391 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LAMA1P25391 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.72■□□□□ 0.91
LAMA1P25391 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMA1P25391 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.72■□□□□ 0.91
LAMA1P25391 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
LAMA1P25391 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LAMA1P25391 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.72■□□□□ 0.91
LAMA1P25391 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMA1P25391 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.72■□□□□ 0.91
LAMA1P25391 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.72■□□□□ 0.91
LAMA1P25391 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LAMA1P25391 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LAMA1P25391 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
LAMA1P25391 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.72■□□□□ 0.91
LAMA1P25391 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LAMA1P25391 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.72■□□□□ 0.91
LAMA1P25391 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.72■□□□□ 0.91
LAMA1P25391 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMA1P25391 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
LAMA1P25391 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.71■□□□□ 0.91
LAMA1P25391 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.71■□□□□ 0.91
LAMA1P25391 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMA1P25391 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LAMA1P25391 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.71■□□□□ 0.91
LAMA1P25391 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.71■□□□□ 0.91
LAMA1P25391 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.71■□□□□ 0.91
LAMA1P25391 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LAMA1P25391 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMA1P25391 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
LAMA1P25391 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMA1P25391 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LAMA1P25391 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.7■□□□□ 0.9
LAMA1P25391 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LAMA1P25391 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMA1P25391 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.7■□□□□ 0.9
LAMA1P25391 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMA1P25391 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.7■□□□□ 0.9
LAMA1P25391 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMA1P25391 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMA1P25391 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
LAMA1P25391 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.7■□□□□ 0.9
LAMA1P25391 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LAMA1P25391 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LAMA1P25391 AC053503.5-201ENST00000601508 636 ntBASIC20.7■□□□□ 0.9
LAMA1P25391 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LAMA1P25391 FAM197Y4-202ENST00000622692 608 ntBASIC20.7■□□□□ 0.9
LAMA1P25391 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.7■□□□□ 0.9
LAMA1P25391 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.7■□□□□ 0.9
LAMA1P25391 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMA1P25391 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMA1P25391 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 MIR718-201ENST00000390190 70 ntBASIC20.69■□□□□ 0.9
LAMA1P25391 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.69■□□□□ 0.9
LAMA1P25391 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms