Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.39■□□□□ 0.69
NR4A1P22736 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NR4A1P22736 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.39■□□□□ 0.69
NR4A1P22736 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR4A1P22736 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NR4A1P22736 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NR4A1P22736 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
NR4A1P22736 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
NR4A1P22736 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR4A1P22736 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.38■□□□□ 0.69
NR4A1P22736 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR4A1P22736 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NR4A1P22736 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NR4A1P22736 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NR4A1P22736 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NR4A1P22736 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NR4A1P22736 AL139246.5-201ENST00000606645 996 ntBASIC19.38■□□□□ 0.69
NR4A1P22736 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.38■□□□□ 0.69
NR4A1P22736 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.38■□□□□ 0.69
NR4A1P22736 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR4A1P22736 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NR4A1P22736 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.37■□□□□ 0.69
NR4A1P22736 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.37■□□□□ 0.69
NR4A1P22736 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NR4A1P22736 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR4A1P22736 UNC93B3-201ENST00000308076 687 ntBASIC19.37■□□□□ 0.69
NR4A1P22736 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
NR4A1P22736 AC110285.6-201ENST00000617652 491 ntBASIC19.37■□□□□ 0.69
NR4A1P22736 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NR4A1P22736 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NR4A1P22736 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR4A1P22736 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR4A1P22736 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.37■□□□□ 0.69
NR4A1P22736 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NR4A1P22736 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.37■□□□□ 0.69
NR4A1P22736 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NR4A1P22736 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.36■□□□□ 0.69
NR4A1P22736 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.36■□□□□ 0.69
NR4A1P22736 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.36■□□□□ 0.69
NR4A1P22736 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR4A1P22736 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR4A1P22736 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.36■□□□□ 0.69
NR4A1P22736 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.36■□□□□ 0.69
NR4A1P22736 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.36■□□□□ 0.69
NR4A1P22736 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.36■□□□□ 0.69
NR4A1P22736 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.36■□□□□ 0.69
NR4A1P22736 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.36■□□□□ 0.69
NR4A1P22736 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR4A1P22736 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.36■□□□□ 0.69
NR4A1P22736 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NR4A1P22736 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NR4A1P22736 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NR4A1P22736 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR4A1P22736 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.36■□□□□ 0.69
NR4A1P22736 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR4A1P22736 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR4A1P22736 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.35■□□□□ 0.69
NR4A1P22736 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NR4A1P22736 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR4A1P22736 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR4A1P22736 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NR4A1P22736 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NR4A1P22736 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NR4A1P22736 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.35■□□□□ 0.69
NR4A1P22736 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.35■□□□□ 0.69
NR4A1P22736 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
NR4A1P22736 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.35■□□□□ 0.69
NR4A1P22736 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR4A1P22736 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR4A1P22736 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR4A1P22736 SYT6-210ENST00000641643 1587 ntBASIC19.35■□□□□ 0.69
NR4A1P22736 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
NR4A1P22736 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR4A1P22736 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR4A1P22736 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.35■□□□□ 0.69
NR4A1P22736 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 FP325331.1-202ENST00000623531 1380 ntBASIC19.34■□□□□ 0.69
NR4A1P22736 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR4A1P22736 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.34■□□□□ 0.69
NR4A1P22736 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms