Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3BP20337 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RAB3BP20337 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB3BP20337 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3BP20337 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB3BP20337 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.39■□□□□ 0.53
RAB3BP20337 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.38■□□□□ 0.53
RAB3BP20337 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RAB3BP20337 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RAB3BP20337 AC003102.1-202ENST00000563394 1796 ntBASIC18.38■□□□□ 0.53
RAB3BP20337 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RAB3BP20337 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB3BP20337 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
RAB3BP20337 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAB3BP20337 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RAB3BP20337 AL034346.1-201ENST00000568244 1277 ntBASIC18.38■□□□□ 0.53
RAB3BP20337 AC087239.1-201ENST00000622671 572 ntBASIC18.38■□□□□ 0.53
RAB3BP20337 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB3BP20337 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RAB3BP20337 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RAB3BP20337 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB3BP20337 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB3BP20337 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB3BP20337 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3BP20337 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3BP20337 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3BP20337 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3BP20337 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3BP20337 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RAB3BP20337 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
RAB3BP20337 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3BP20337 Z92544.1-202ENST00000571933 1220 ntBASIC18.37■□□□□ 0.53
RAB3BP20337 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3BP20337 AC241377.3-202ENST00000626088 1088 ntBASIC18.37■□□□□ 0.53
RAB3BP20337 AC241585.3-202ENST00000628937 1088 ntBASIC18.37■□□□□ 0.53
RAB3BP20337 AC245100.8-202ENST00000629247 1058 ntBASIC18.37■□□□□ 0.53
RAB3BP20337 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3BP20337 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3BP20337 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RAB3BP20337 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3BP20337 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RAB3BP20337 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3BP20337 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3BP20337 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RAB3BP20337 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3BP20337 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RAB3BP20337 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3BP20337 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB3BP20337 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB3BP20337 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3BP20337 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3BP20337 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.36■□□□□ 0.53
RAB3BP20337 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3BP20337 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3BP20337 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RAB3BP20337 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RAB3BP20337 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3BP20337 PLK5-205ENST00000642079 1969 ntBASIC18.36■□□□□ 0.53
RAB3BP20337 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3BP20337 PCDHAC2-203ENST00000615316 3011 ntBASIC18.36■□□□□ 0.53
RAB3BP20337 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3BP20337 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB3BP20337 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB3BP20337 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3BP20337 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3BP20337 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3BP20337 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3BP20337 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3BP20337 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB3BP20337 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAB3BP20337 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB3BP20337 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3BP20337 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB3BP20337 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3BP20337 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
RAB3BP20337 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB3BP20337 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB3BP20337 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB3BP20337 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms