Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.5■□□□□ 0.71
TNFRSF1BP20333 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 PLK5-205ENST00000642079 1969 ntBASIC19.49■□□□□ 0.71
TNFRSF1BP20333 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF1BP20333 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFRSF1BP20333 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 AL136116.3-201ENST00000402907 1138 ntBASIC19.47■□□□□ 0.71
TNFRSF1BP20333 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 MIR4767-201ENST00000582827 78 ntBASIC19.47■□□□□ 0.71
TNFRSF1BP20333 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF1BP20333 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 AL391422.3-201ENST00000603791 2761 ntBASIC19.46■□□□□ 0.71
TNFRSF1BP20333 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF1BP20333 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms