Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.59■□□□□ 0.89
HOXB3P14651 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXB3P14651 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HOXB3P14651 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXB3P14651 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.59■□□□□ 0.89
HOXB3P14651 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.59■□□□□ 0.89
HOXB3P14651 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.59■□□□□ 0.89
HOXB3P14651 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXB3P14651 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.59■□□□□ 0.89
HOXB3P14651 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HOXB3P14651 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXB3P14651 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXB3P14651 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXB3P14651 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HOXB3P14651 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXB3P14651 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXB3P14651 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.58■□□□□ 0.89
HOXB3P14651 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.58■□□□□ 0.89
HOXB3P14651 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HOXB3P14651 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.58■□□□□ 0.89
HOXB3P14651 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXB3P14651 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
HOXB3P14651 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.58■□□□□ 0.89
HOXB3P14651 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.58■□□□□ 0.89
HOXB3P14651 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.58■□□□□ 0.88
HOXB3P14651 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HOXB3P14651 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.58■□□□□ 0.88
HOXB3P14651 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXB3P14651 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXB3P14651 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXB3P14651 CLDN5-201ENST00000403084 2357 ntBASIC20.57■□□□□ 0.88
HOXB3P14651 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXB3P14651 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXB3P14651 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXB3P14651 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXB3P14651 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXB3P14651 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXB3P14651 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXB3P14651 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HOXB3P14651 AC142381.4-202ENST00000563973 229 ntBASIC20.57■□□□□ 0.88
HOXB3P14651 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.57■□□□□ 0.88
HOXB3P14651 AC073912.3-201ENST00000624414 853 ntBASIC20.57■□□□□ 0.88
HOXB3P14651 MYCNOS-205ENST00000641950 531 ntBASIC20.57■□□□□ 0.88
HOXB3P14651 AC092053.2-201ENST00000640557 1818 ntBASIC20.57■□□□□ 0.88
HOXB3P14651 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HOXB3P14651 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXB3P14651 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
HOXB3P14651 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXB3P14651 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXB3P14651 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HOXB3P14651 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXB3P14651 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXB3P14651 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.56■□□□□ 0.88
HOXB3P14651 AC138907.5-202ENST00000569484 235 ntBASIC20.56■□□□□ 0.88
HOXB3P14651 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.56■□□□□ 0.88
HOXB3P14651 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HOXB3P14651 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXB3P14651 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXB3P14651 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXB3P14651 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HOXB3P14651 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXB3P14651 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXB3P14651 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXB3P14651 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXB3P14651 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXB3P14651 AC073210.2-201ENST00000430369 194 ntBASIC20.55■□□□□ 0.88
HOXB3P14651 AC010141.2-201ENST00000452426 721 ntBASIC20.55■□□□□ 0.88
HOXB3P14651 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXB3P14651 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXB3P14651 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXB3P14651 AL034346.1-201ENST00000568244 1277 ntBASIC20.55■□□□□ 0.88
HOXB3P14651 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXB3P14651 AC231657.2-201ENST00000624556 255 ntBASIC20.55■□□□□ 0.88
HOXB3P14651 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXB3P14651 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXB3P14651 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXB3P14651 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXB3P14651 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HOXB3P14651 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXB3P14651 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
HOXB3P14651 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 FAM99A-202ENST00000538190 1989 ntBASIC20.54■□□□□ 0.88
HOXB3P14651 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
HOXB3P14651 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXB3P14651 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms