Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TCRAP04437 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRAP04437 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.98■□□□□ 0.15
TCRAP04437 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRAP04437 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRAP04437 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.98■□□□□ 0.15
TCRAP04437 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TCRAP04437 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRAP04437 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRAP04437 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TCRAP04437 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TCRAP04437 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TCRAP04437 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TCRAP04437 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TCRAP04437 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.97■□□□□ 0.15
TCRAP04437 AP004607.7-201ENST00000527152 1677 ntBASIC15.97■□□□□ 0.15
TCRAP04437 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TCRAP04437 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.97■□□□□ 0.15
TCRAP04437 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TCRAP04437 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRAP04437 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TCRAP04437 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
TCRAP04437 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRAP04437 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRAP04437 MIR6724-1-201ENST00000616420 92 ntBASIC15.96■□□□□ 0.15
TCRAP04437 MIR6724-2-201ENST00000616483 92 ntBASIC15.96■□□□□ 0.15
TCRAP04437 MIR6724-4-201ENST00000617390 92 ntBASIC15.96■□□□□ 0.15
TCRAP04437 MIR6724-3-201ENST00000622482 92 ntBASIC15.96■□□□□ 0.15
TCRAP04437 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRAP04437 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
TCRAP04437 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TCRAP04437 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TCRAP04437 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TCRAP04437 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TCRAP04437 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TCRAP04437 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.95■□□□□ 0.14
TCRAP04437 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
TCRAP04437 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRAP04437 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TCRAP04437 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRAP04437 PLK5-205ENST00000642079 1969 ntBASIC15.95■□□□□ 0.14
TCRAP04437 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.95■□□□□ 0.14
TCRAP04437 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TCRAP04437 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRAP04437 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRAP04437 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRAP04437 AC099791.2-201ENST00000605725 427 ntBASIC15.95■□□□□ 0.14
TCRAP04437 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.95■□□□□ 0.14
TCRAP04437 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TCRAP04437 AC007952.6-201ENST00000573168 2673 ntBASIC15.95■□□□□ 0.14
TCRAP04437 AC003957.1-201ENST00000625108 2673 ntBASIC15.95■□□□□ 0.14
TCRAP04437 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TCRAP04437 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRAP04437 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRAP04437 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRAP04437 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRAP04437 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TCRAP04437 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TCRAP04437 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRAP04437 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.94■□□□□ 0.14
TCRAP04437 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRAP04437 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TCRAP04437 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 AC239859.2-201ENST00000444165 318 ntBASIC15.94■□□□□ 0.14
TCRAP04437 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TCRAP04437 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms