Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SCN2BO60939 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
SCN2BO60939 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN2BO60939 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.93■□□□□ 0.78
SCN2BO60939 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN2BO60939 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN2BO60939 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN2BO60939 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN2BO60939 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN2BO60939 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN2BO60939 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.93■□□□□ 0.78
SCN2BO60939 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.93■□□□□ 0.78
SCN2BO60939 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN2BO60939 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.92■□□□□ 0.78
SCN2BO60939 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN2BO60939 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN2BO60939 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SCN2BO60939 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SCN2BO60939 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN2BO60939 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.92■□□□□ 0.78
SCN2BO60939 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN2BO60939 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.92■□□□□ 0.78
SCN2BO60939 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN2BO60939 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN2BO60939 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN2BO60939 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SCN2BO60939 AC009237.3-201ENST00000393279 1427 ntBASIC19.92■□□□□ 0.78
SCN2BO60939 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.92■□□□□ 0.78
SCN2BO60939 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN2BO60939 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN2BO60939 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN2BO60939 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN2BO60939 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN2BO60939 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCN2BO60939 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN2BO60939 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN2BO60939 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.91■□□□□ 0.78
SCN2BO60939 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.91■□□□□ 0.78
SCN2BO60939 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN2BO60939 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCN2BO60939 AC008764.7-201ENST00000593779 1081 ntBASIC19.91■□□□□ 0.78
SCN2BO60939 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.91■□□□□ 0.78
SCN2BO60939 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCN2BO60939 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCN2BO60939 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN2BO60939 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN2BO60939 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.91■□□□□ 0.78
SCN2BO60939 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN2BO60939 AC073130.3-201ENST00000624389 2278 ntBASIC19.91■□□□□ 0.78
SCN2BO60939 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN2BO60939 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN2BO60939 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN2BO60939 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
SCN2BO60939 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN2BO60939 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN2BO60939 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN2BO60939 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN2BO60939 AC099791.1-201ENST00000416440 715 ntBASIC19.9■□□□□ 0.78
SCN2BO60939 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN2BO60939 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN2BO60939 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN2BO60939 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN2BO60939 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN2BO60939 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN2BO60939 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.89■□□□□ 0.78
SCN2BO60939 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCN2BO60939 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN2BO60939 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SCN2BO60939 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN2BO60939 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.89■□□□□ 0.77
SCN2BO60939 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SCN2BO60939 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCN2BO60939 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.89■□□□□ 0.77
SCN2BO60939 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
SCN2BO60939 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SCN2BO60939 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SCN2BO60939 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SCN2BO60939 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN2BO60939 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 AC008406.3-201ENST00000620001 1374 ntBASIC19.88■□□□□ 0.77
SCN2BO60939 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SCN2BO60939 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SCN2BO60939 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.88■□□□□ 0.77
SCN2BO60939 AC096631.2-201ENST00000436136 790 ntBASIC19.88■□□□□ 0.77
SCN2BO60939 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.88■□□□□ 0.77
SCN2BO60939 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.88■□□□□ 0.77
SCN2BO60939 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN2BO60939 AC106739.1-201ENST00000617035 715 ntBASIC19.88■□□□□ 0.77
SCN2BO60939 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN2BO60939 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 356.8 ms