Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
URB1O60287 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
URB1O60287 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
URB1O60287 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
URB1O60287 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.87■□□□□ 0.77
URB1O60287 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
URB1O60287 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.87■□□□□ 0.77
URB1O60287 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
URB1O60287 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
URB1O60287 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
URB1O60287 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
URB1O60287 PKD1P6-201ENST00000343738 4769 ntBASIC19.86■□□□□ 0.77
URB1O60287 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
URB1O60287 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.86■□□□□ 0.77
URB1O60287 AL355472.2-201ENST00000422958 438 ntBASIC19.86■□□□□ 0.77
URB1O60287 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.86■□□□□ 0.77
URB1O60287 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
URB1O60287 AC133561.5-201ENST00000635547 218 ntBASIC19.86■□□□□ 0.77
URB1O60287 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
URB1O60287 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
URB1O60287 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
URB1O60287 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.86■□□□□ 0.77
URB1O60287 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.86■□□□□ 0.77
URB1O60287 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
URB1O60287 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
URB1O60287 LSM12P1-201ENST00000411836 588 ntBASIC19.86■□□□□ 0.77
URB1O60287 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
URB1O60287 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.86■□□□□ 0.77
URB1O60287 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.86■□□□□ 0.77
URB1O60287 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.86■□□□□ 0.77
URB1O60287 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.86■□□□□ 0.77
URB1O60287 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
URB1O60287 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
URB1O60287 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
URB1O60287 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
URB1O60287 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.85■□□□□ 0.77
URB1O60287 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.85■□□□□ 0.77
URB1O60287 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.85■□□□□ 0.77
URB1O60287 AC008175.2-201ENST00000612840 297 ntBASIC19.85■□□□□ 0.77
URB1O60287 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
URB1O60287 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.85■□□□□ 0.77
URB1O60287 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
URB1O60287 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
URB1O60287 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.85■□□□□ 0.77
URB1O60287 AC060766.5-201ENST00000590539 871 ntBASIC19.85■□□□□ 0.77
URB1O60287 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.84■□□□□ 0.77
URB1O60287 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.84■□□□□ 0.77
URB1O60287 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
URB1O60287 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.84■□□□□ 0.77
URB1O60287 KRT17P2-201ENST00000300992 1314 ntBASIC19.84■□□□□ 0.77
URB1O60287 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.84■□□□□ 0.77
URB1O60287 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.84■□□□□ 0.77
URB1O60287 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
URB1O60287 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.84■□□□□ 0.77
URB1O60287 KRT16P2-201ENST00000414673 1423 ntBASIC19.84■□□□□ 0.77
URB1O60287 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
URB1O60287 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
URB1O60287 RCN1P1-201ENST00000400413 996 ntBASIC19.83■□□□□ 0.77
URB1O60287 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.83■□□□□ 0.77
URB1O60287 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
URB1O60287 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.83■□□□□ 0.77
URB1O60287 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.83■□□□□ 0.77
URB1O60287 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.83■□□□□ 0.77
URB1O60287 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
URB1O60287 AC069544.1-201ENST00000609399 999 ntBASIC19.83■□□□□ 0.77
URB1O60287 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.83■□□□□ 0.77
URB1O60287 AC097493.4-201ENST00000641197 219 ntBASIC19.83■□□□□ 0.77
URB1O60287 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
URB1O60287 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
URB1O60287 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
URB1O60287 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
URB1O60287 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
URB1O60287 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
URB1O60287 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
URB1O60287 KRT17P1-201ENST00000399211 1546 ntBASIC19.83■□□□□ 0.76
URB1O60287 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
URB1O60287 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
URB1O60287 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
URB1O60287 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
URB1O60287 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
URB1O60287 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.83■□□□□ 0.76
URB1O60287 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
URB1O60287 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
URB1O60287 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
URB1O60287 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.82■□□□□ 0.76
URB1O60287 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
URB1O60287 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
URB1O60287 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms