Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.88■□□□□ 0.77
CLOCKO15516 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLOCKO15516 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLOCKO15516 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLOCKO15516 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLOCKO15516 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLOCKO15516 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
CLOCKO15516 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.87■□□□□ 0.77
CLOCKO15516 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLOCKO15516 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.87■□□□□ 0.77
CLOCKO15516 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLOCKO15516 AL049796.1-201ENST00000565336 1766 ntBASIC19.87■□□□□ 0.77
CLOCKO15516 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLOCKO15516 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLOCKO15516 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLOCKO15516 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.87■□□□□ 0.77
CLOCKO15516 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLOCKO15516 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLOCKO15516 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLOCKO15516 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLOCKO15516 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.86■□□□□ 0.77
CLOCKO15516 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.86■□□□□ 0.77
CLOCKO15516 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.86■□□□□ 0.77
CLOCKO15516 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.86■□□□□ 0.77
CLOCKO15516 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.86■□□□□ 0.77
CLOCKO15516 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLOCKO15516 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLOCKO15516 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.86■□□□□ 0.77
CLOCKO15516 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLOCKO15516 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLOCKO15516 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLOCKO15516 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLOCKO15516 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLOCKO15516 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.86■□□□□ 0.77
CLOCKO15516 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
CLOCKO15516 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CLOCKO15516 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.86■□□□□ 0.77
CLOCKO15516 OR7E47P-201ENST00000546390 1422 ntBASIC19.85■□□□□ 0.77
CLOCKO15516 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.85■□□□□ 0.77
CLOCKO15516 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLOCKO15516 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.85■□□□□ 0.77
CLOCKO15516 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.85■□□□□ 0.77
CLOCKO15516 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLOCKO15516 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.85■□□□□ 0.77
CLOCKO15516 AL499627.2-201ENST00000606283 725 ntBASIC19.85■□□□□ 0.77
CLOCKO15516 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
CLOCKO15516 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLOCKO15516 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.85■□□□□ 0.77
CLOCKO15516 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.85■□□□□ 0.77
CLOCKO15516 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLOCKO15516 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLOCKO15516 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CLOCKO15516 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLOCKO15516 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLOCKO15516 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.84■□□□□ 0.77
CLOCKO15516 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLOCKO15516 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.84■□□□□ 0.77
CLOCKO15516 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLOCKO15516 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.84■□□□□ 0.77
CLOCKO15516 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.84■□□□□ 0.77
CLOCKO15516 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLOCKO15516 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLOCKO15516 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLOCKO15516 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLOCKO15516 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLOCKO15516 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.84■□□□□ 0.77
CLOCKO15516 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLOCKO15516 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.84■□□□□ 0.77
CLOCKO15516 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.83■□□□□ 0.77
CLOCKO15516 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLOCKO15516 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.83■□□□□ 0.77
CLOCKO15516 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CLOCKO15516 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CLOCKO15516 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLOCKO15516 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.83■□□□□ 0.77
CLOCKO15516 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLOCKO15516 PBX2P1-201ENST00000493219 1291 ntBASIC19.83■□□□□ 0.77
CLOCKO15516 AL031602.1-201ENST00000633169 911 ntBASIC19.83■□□□□ 0.77
CLOCKO15516 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLOCKO15516 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLOCKO15516 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CLOCKO15516 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CLOCKO15516 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLOCKO15516 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.83■□□□□ 0.76
CLOCKO15516 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLOCKO15516 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLOCKO15516 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLOCKO15516 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLOCKO15516 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLOCKO15516 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms