Protein–RNA interactions for Protein: O15446

CD3EAP, DNA-directed RNA polymerase I subunit RPA34, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3EAPO15446 AC079140.4-201ENST00000507448 529 ntBASIC20.97■□□□□ 0.95
CD3EAPO15446 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.97■□□□□ 0.95
CD3EAPO15446 EEF1DP3-203ENST00000566025 782 ntBASIC20.97■□□□□ 0.95
CD3EAPO15446 AC053503.5-201ENST00000601508 636 ntBASIC20.97■□□□□ 0.95
CD3EAPO15446 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD3EAPO15446 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD3EAPO15446 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD3EAPO15446 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.96■□□□□ 0.95
CD3EAPO15446 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD3EAPO15446 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD3EAPO15446 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CD3EAPO15446 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD3EAPO15446 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CD3EAPO15446 LINC02228-203ENST00000641970 1355 ntBASIC20.96■□□□□ 0.95
CD3EAPO15446 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.95■□□□□ 0.95
CD3EAPO15446 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD3EAPO15446 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD3EAPO15446 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CD3EAPO15446 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD3EAPO15446 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.95■□□□□ 0.94
CD3EAPO15446 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD3EAPO15446 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.95■□□□□ 0.94
CD3EAPO15446 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD3EAPO15446 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD3EAPO15446 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD3EAPO15446 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.95■□□□□ 0.94
CD3EAPO15446 AL049796.1-201ENST00000565336 1766 ntBASIC20.95■□□□□ 0.94
CD3EAPO15446 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
CD3EAPO15446 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.94■□□□□ 0.94
CD3EAPO15446 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 AC123595.1-201ENST00000440769 1046 ntBASIC20.94■□□□□ 0.94
CD3EAPO15446 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.94■□□□□ 0.94
CD3EAPO15446 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.94■□□□□ 0.94
CD3EAPO15446 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3EAPO15446 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CD3EAPO15446 KRT87P-202ENST00000534226 1464 ntBASIC20.94■□□□□ 0.94
CD3EAPO15446 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD3EAPO15446 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD3EAPO15446 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.93■□□□□ 0.94
CD3EAPO15446 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.93■□□□□ 0.94
CD3EAPO15446 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.93■□□□□ 0.94
CD3EAPO15446 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD3EAPO15446 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CD3EAPO15446 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CD3EAPO15446 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD3EAPO15446 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD3EAPO15446 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD3EAPO15446 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
CD3EAPO15446 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD3EAPO15446 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CD3EAPO15446 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD3EAPO15446 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CD3EAPO15446 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD3EAPO15446 YBX1P1-201ENST00000445822 960 ntBASIC20.92■□□□□ 0.94
CD3EAPO15446 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.92■□□□□ 0.94
CD3EAPO15446 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD3EAPO15446 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CD3EAPO15446 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD3EAPO15446 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.92■□□□□ 0.94
CD3EAPO15446 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CD3EAPO15446 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CD3EAPO15446 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD3EAPO15446 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD3EAPO15446 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD3EAPO15446 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD3EAPO15446 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD3EAPO15446 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.91■□□□□ 0.94
CD3EAPO15446 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CD3EAPO15446 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD3EAPO15446 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.91■□□□□ 0.94
CD3EAPO15446 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD3EAPO15446 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD3EAPO15446 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD3EAPO15446 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CD3EAPO15446 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD3EAPO15446 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD3EAPO15446 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CD3EAPO15446 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CD3EAPO15446 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD3EAPO15446 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD3EAPO15446 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CD3EAPO15446 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD3EAPO15446 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.9■□□□□ 0.94
CD3EAPO15446 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD3EAPO15446 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CD3EAPO15446 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.9■□□□□ 0.94
CD3EAPO15446 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.9■□□□□ 0.94
CD3EAPO15446 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD3EAPO15446 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.9■□□□□ 0.94
CD3EAPO15446 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CD3EAPO15446 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms