Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDX4O14627 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDX4O14627 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDX4O14627 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDX4O14627 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDX4O14627 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.5■□□□□ 0.87
CDX4O14627 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.5■□□□□ 0.87
CDX4O14627 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.5■□□□□ 0.87
CDX4O14627 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDX4O14627 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDX4O14627 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDX4O14627 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDX4O14627 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDX4O14627 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.5■□□□□ 0.87
CDX4O14627 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDX4O14627 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDX4O14627 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDX4O14627 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDX4O14627 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CDX4O14627 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.49■□□□□ 0.87
CDX4O14627 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDX4O14627 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDX4O14627 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDX4O14627 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.48■□□□□ 0.87
CDX4O14627 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDX4O14627 AC092368.3-202ENST00000574180 1591 ntBASIC20.48■□□□□ 0.87
CDX4O14627 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CDX4O14627 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDX4O14627 AC091799.1-201ENST00000422823 811 ntBASIC20.48■□□□□ 0.87
CDX4O14627 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.48■□□□□ 0.87
CDX4O14627 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.48■□□□□ 0.87
CDX4O14627 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDX4O14627 BX088651.1-201ENST00000540551 451 ntBASIC20.48■□□□□ 0.87
CDX4O14627 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDX4O14627 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.48■□□□□ 0.87
CDX4O14627 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.48■□□□□ 0.87
CDX4O14627 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CDX4O14627 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDX4O14627 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.47■□□□□ 0.87
CDX4O14627 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDX4O14627 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.47■□□□□ 0.87
CDX4O14627 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDX4O14627 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.47■□□□□ 0.87
CDX4O14627 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.47■□□□□ 0.87
CDX4O14627 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.47■□□□□ 0.87
CDX4O14627 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDX4O14627 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.47■□□□□ 0.87
CDX4O14627 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.47■□□□□ 0.87
CDX4O14627 AC069544.1-201ENST00000609399 999 ntBASIC20.47■□□□□ 0.87
CDX4O14627 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDX4O14627 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDX4O14627 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDX4O14627 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.46■□□□□ 0.87
CDX4O14627 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDX4O14627 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDX4O14627 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.46■□□□□ 0.87
CDX4O14627 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CDX4O14627 AL589743.5-201ENST00000616611 1050 ntBASIC20.46■□□□□ 0.87
CDX4O14627 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDX4O14627 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.46■□□□□ 0.87
CDX4O14627 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.46■□□□□ 0.87
CDX4O14627 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
CDX4O14627 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDX4O14627 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.45■□□□□ 0.86
CDX4O14627 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CDX4O14627 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDX4O14627 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDX4O14627 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDX4O14627 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.45■□□□□ 0.86
CDX4O14627 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.45■□□□□ 0.86
CDX4O14627 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.45■□□□□ 0.86
CDX4O14627 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDX4O14627 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.45■□□□□ 0.86
CDX4O14627 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDX4O14627 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.45■□□□□ 0.86
CDX4O14627 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.44■□□□□ 0.86
CDX4O14627 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CDX4O14627 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.44■□□□□ 0.86
CDX4O14627 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CDX4O14627 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDX4O14627 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDX4O14627 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDX4O14627 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDX4O14627 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.44■□□□□ 0.86
CDX4O14627 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.44■□□□□ 0.86
CDX4O14627 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.44■□□□□ 0.86
CDX4O14627 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CDX4O14627 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDX4O14627 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDX4O14627 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.44■□□□□ 0.86
CDX4O14627 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
CDX4O14627 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDX4O14627 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDX4O14627 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.43■□□□□ 0.86
CDX4O14627 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CDX4O14627 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.43■□□□□ 0.86
CDX4O14627 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDX4O14627 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDX4O14627 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.43■□□□□ 0.86
CDX4O14627 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms