Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTCAO00442 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTCAO00442 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTCAO00442 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTCAO00442 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTCAO00442 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTCAO00442 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.04■□□□□ 0.8
RTCAO00442 AC053503.5-201ENST00000601508 636 ntBASIC20.04■□□□□ 0.8
RTCAO00442 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTCAO00442 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTCAO00442 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.04■□□□□ 0.8
RTCAO00442 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.04■□□□□ 0.8
RTCAO00442 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTCAO00442 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTCAO00442 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.04■□□□□ 0.8
RTCAO00442 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.03■□□□□ 0.8
RTCAO00442 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RTCAO00442 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.03■□□□□ 0.8
RTCAO00442 DUX4L2-201ENST00000561772 1275 ntBASIC20.03■□□□□ 0.8
RTCAO00442 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.03■□□□□ 0.8
RTCAO00442 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 AC087623.3-201ENST00000607047 1098 ntBASIC20.03■□□□□ 0.8
RTCAO00442 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.03■□□□□ 0.8
RTCAO00442 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
RTCAO00442 DUX4L6-201ENST00000626483 1275 ntBASIC20.03■□□□□ 0.8
RTCAO00442 DUX4L1-201ENST00000627662 1275 ntBASIC20.03■□□□□ 0.8
RTCAO00442 DUX4L8-201ENST00000629013 1275 ntBASIC20.03■□□□□ 0.8
RTCAO00442 DUX4L3-201ENST00000630187 1275 ntBASIC20.03■□□□□ 0.8
RTCAO00442 DUX4L7-201ENST00000630678 1275 ntBASIC20.03■□□□□ 0.8
RTCAO00442 DUX4L5-201ENST00000630834 1275 ntBASIC20.03■□□□□ 0.8
RTCAO00442 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.03■□□□□ 0.8
RTCAO00442 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RTCAO00442 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTCAO00442 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RTCAO00442 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTCAO00442 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTCAO00442 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.02■□□□□ 0.8
RTCAO00442 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTCAO00442 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.02■□□□□ 0.8
RTCAO00442 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.02■□□□□ 0.8
RTCAO00442 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTCAO00442 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTCAO00442 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTCAO00442 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.02■□□□□ 0.8
RTCAO00442 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.02■□□□□ 0.8
RTCAO00442 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.02■□□□□ 0.8
RTCAO00442 AC097381.1-201ENST00000429019 1296 ntBASIC20.02■□□□□ 0.8
RTCAO00442 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.02■□□□□ 0.8
RTCAO00442 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTCAO00442 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.02■□□□□ 0.8
RTCAO00442 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTCAO00442 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTCAO00442 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTCAO00442 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RTCAO00442 AC004854.2-201ENST00000608450 1441 ntBASIC20.02■□□□□ 0.79
RTCAO00442 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.01■□□□□ 0.79
RTCAO00442 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.01■□□□□ 0.79
RTCAO00442 KRT18P61-201ENST00000585825 1298 ntBASIC20.01■□□□□ 0.79
RTCAO00442 AC104187.1-201ENST00000607510 612 ntBASIC20.01■□□□□ 0.79
RTCAO00442 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.01■□□□□ 0.79
RTCAO00442 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.01■□□□□ 0.79
RTCAO00442 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.01■□□□□ 0.79
RTCAO00442 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTCAO00442 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
RTCAO00442 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RTCAO00442 AC061975.6-201ENST00000579045 1553 ntBASIC20■□□□□ 0.79
RTCAO00442 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20■□□□□ 0.79
RTCAO00442 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTCAO00442 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RTCAO00442 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTCAO00442 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTCAO00442 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTCAO00442 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20■□□□□ 0.79
RTCAO00442 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms