Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TLR4O00206 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TLR4O00206 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.85■□□□□ 0.93
TLR4O00206 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.85■□□□□ 0.93
TLR4O00206 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TLR4O00206 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TLR4O00206 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.85■□□□□ 0.93
TLR4O00206 FAM201B-201ENST00000458407 597 ntBASIC20.85■□□□□ 0.93
TLR4O00206 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.85■□□□□ 0.93
TLR4O00206 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TLR4O00206 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.85■□□□□ 0.93
TLR4O00206 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TLR4O00206 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TLR4O00206 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TLR4O00206 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TLR4O00206 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TLR4O00206 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TLR4O00206 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.84■□□□□ 0.93
TLR4O00206 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TLR4O00206 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TLR4O00206 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TLR4O00206 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.84■□□□□ 0.93
TLR4O00206 AC093787.1-201ENST00000450396 207 ntBASIC20.84■□□□□ 0.93
TLR4O00206 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.84■□□□□ 0.93
TLR4O00206 AC016405.3-201ENST00000607710 860 ntBASIC20.84■□□□□ 0.93
TLR4O00206 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TLR4O00206 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
TLR4O00206 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TLR4O00206 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TLR4O00206 KRT16P2-201ENST00000414673 1423 ntBASIC20.84■□□□□ 0.93
TLR4O00206 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TLR4O00206 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TLR4O00206 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.84■□□□□ 0.93
TLR4O00206 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.84■□□□□ 0.93
TLR4O00206 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TLR4O00206 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TLR4O00206 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TLR4O00206 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TLR4O00206 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TLR4O00206 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TLR4O00206 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.83■□□□□ 0.93
TLR4O00206 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.83■□□□□ 0.93
TLR4O00206 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
TLR4O00206 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TLR4O00206 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TLR4O00206 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TLR4O00206 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.82■□□□□ 0.92
TLR4O00206 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TLR4O00206 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.82■□□□□ 0.92
TLR4O00206 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
TLR4O00206 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TLR4O00206 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.82■□□□□ 0.92
TLR4O00206 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.82■□□□□ 0.92
TLR4O00206 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TLR4O00206 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TLR4O00206 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TLR4O00206 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.82■□□□□ 0.92
TLR4O00206 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TLR4O00206 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TLR4O00206 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TLR4O00206 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TLR4O00206 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TLR4O00206 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TLR4O00206 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TLR4O00206 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TLR4O00206 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TLR4O00206 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.81■□□□□ 0.92
TLR4O00206 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.81■□□□□ 0.92
TLR4O00206 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
TLR4O00206 AC092118.2-201ENST00000613495 667 ntBASIC20.81■□□□□ 0.92
TLR4O00206 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TLR4O00206 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.81■□□□□ 0.92
TLR4O00206 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TLR4O00206 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.81■□□□□ 0.92
TLR4O00206 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
TLR4O00206 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TLR4O00206 EP400NL-214ENST00000641289 2402 ntBASIC20.8■□□□□ 0.92
TLR4O00206 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TLR4O00206 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 RBM17P2-201ENST00000616397 1405 ntBASIC20.8■□□□□ 0.92
TLR4O00206 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.8■□□□□ 0.92
TLR4O00206 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.8■□□□□ 0.92
TLR4O00206 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.8■□□□□ 0.92
TLR4O00206 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.8■□□□□ 0.92
TLR4O00206 AL591742.1-201ENST00000604433 565 ntBASIC20.8■□□□□ 0.92
TLR4O00206 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TLR4O00206 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TLR4O00206 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TLR4O00206 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TLR4O00206 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms