Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPA2E9PIF3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NPIPA2E9PIF3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NPIPA2E9PIF3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.14■□□□□ 0.65
NPIPA2E9PIF3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 KRT18P20-201ENST00000548986 1279 ntBASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 AC005181.1-201ENST00000604782 1256 ntBASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 FAM99A-202ENST00000538190 1989 ntBASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.13■□□□□ 0.65
NPIPA2E9PIF3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 AL121832.2-201ENST00000610979 668 ntBASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPIPA2E9PIF3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 AC083906.2-201ENST00000511578 360 ntBASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 EEF1DP3-203ENST00000566025 782 ntBASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 AC053503.5-201ENST00000601508 636 ntBASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 AL050303.2-201ENST00000619798 666 ntBASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA2E9PIF3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms