Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NACAE9PAV3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NACAE9PAV3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NACAE9PAV3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NACAE9PAV3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NACAE9PAV3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NACAE9PAV3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NACAE9PAV3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.28■□□□□ 0.04
NACAE9PAV3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.28■□□□□ 0.04
NACAE9PAV3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.28■□□□□ 0.04
NACAE9PAV3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.28■□□□□ 0.04
NACAE9PAV3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.27■□□□□ 0.04
NACAE9PAV3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NACAE9PAV3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NACAE9PAV3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NACAE9PAV3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NACAE9PAV3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NACAE9PAV3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.27■□□□□ 0.04
NACAE9PAV3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NACAE9PAV3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NACAE9PAV3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NACAE9PAV3 MIR572-201ENST00000384983 95 ntBASIC15.27■□□□□ 0.03
NACAE9PAV3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
NACAE9PAV3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NACAE9PAV3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NACAE9PAV3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NACAE9PAV3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.27■□□□□ 0.03
NACAE9PAV3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.27■□□□□ 0.03
NACAE9PAV3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NACAE9PAV3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.26■□□□□ 0.03
NACAE9PAV3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NACAE9PAV3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.26■□□□□ 0.03
NACAE9PAV3 IGHV3-19-201ENST00000521488 291 ntBASIC15.26■□□□□ 0.03
NACAE9PAV3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NACAE9PAV3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NACAE9PAV3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.26■□□□□ 0.03
NACAE9PAV3 AC005229.4-201ENST00000610085 2198 ntBASIC15.26■□□□□ 0.03
NACAE9PAV3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NACAE9PAV3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.26■□□□□ 0.03
NACAE9PAV3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NACAE9PAV3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NACAE9PAV3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.26■□□□□ 0.03
NACAE9PAV3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
NACAE9PAV3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.26■□□□□ 0.03
NACAE9PAV3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NACAE9PAV3 AC010141.3-201ENST00000456659 717 ntBASIC15.26■□□□□ 0.03
NACAE9PAV3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.26■□□□□ 0.03
NACAE9PAV3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.26■□□□□ 0.03
NACAE9PAV3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.26■□□□□ 0.03
NACAE9PAV3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NACAE9PAV3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NACAE9PAV3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NACAE9PAV3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NACAE9PAV3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.25■□□□□ 0.03
NACAE9PAV3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.25■□□□□ 0.03
NACAE9PAV3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NACAE9PAV3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NACAE9PAV3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NACAE9PAV3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NACAE9PAV3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.25■□□□□ 0.03
NACAE9PAV3 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.25■□□□□ 0.03
NACAE9PAV3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NACAE9PAV3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NACAE9PAV3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.25■□□□□ 0.03
NACAE9PAV3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NACAE9PAV3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NACAE9PAV3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NACAE9PAV3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NACAE9PAV3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.24■□□□□ 0.03
NACAE9PAV3 AL024507.2-201ENST00000606070 2574 ntBASIC15.24■□□□□ 0.03
NACAE9PAV3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 DUX4L2-201ENST00000561772 1275 ntBASIC15.24■□□□□ 0.03
NACAE9PAV3 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.24■□□□□ 0.03
NACAE9PAV3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
NACAE9PAV3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NACAE9PAV3 DUX4L6-201ENST00000626483 1275 ntBASIC15.24■□□□□ 0.03
NACAE9PAV3 DUX4L1-201ENST00000627662 1275 ntBASIC15.24■□□□□ 0.03
NACAE9PAV3 DUX4L8-201ENST00000629013 1275 ntBASIC15.24■□□□□ 0.03
NACAE9PAV3 DUX4L3-201ENST00000630187 1275 ntBASIC15.24■□□□□ 0.03
NACAE9PAV3 DUX4L7-201ENST00000630678 1275 ntBASIC15.24■□□□□ 0.03
NACAE9PAV3 DUX4L5-201ENST00000630834 1275 ntBASIC15.24■□□□□ 0.03
NACAE9PAV3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.24■□□□□ 0.03
NACAE9PAV3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NACAE9PAV3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.23■□□□□ 0.03
NACAE9PAV3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NACAE9PAV3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NACAE9PAV3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NACAE9PAV3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NACAE9PAV3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms