Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 AC012414.1-201ENST00000556676 535 ntBASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49BA6NDI0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49BA6NDI0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49BA6NDI0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM49BA6NDI0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM49BA6NDI0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM49BA6NDI0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49BA6NDI0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM49BA6NDI0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 AC142381.2-201ENST00000566120 298 ntBASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 MIR6084-201ENST00000622012 110 ntBASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49BA6NDI0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 TPRG1LP1-201ENST00000598702 760 ntBASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49BA6NDI0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM49BA6NDI0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
TRIM49BA6NDI0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM49BA6NDI0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM49BA6NDI0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM49BA6NDI0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.14■■□□□ 1.29
TRIM49BA6NDI0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms