Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 AC053503.5-201ENST00000601508 636 ntBASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC162PA2VCL2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.02■□□□□ 0.95
CCDC162PA2VCL2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC162PA2VCL2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 KRT87P-202ENST00000534226 1464 ntBASIC21.01■□□□□ 0.95
CCDC162PA2VCL2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC162PA2VCL2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC162PA2VCL2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC162PA2VCL2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC162PA2VCL2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21■□□□□ 0.95
CCDC162PA2VCL2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC162PA2VCL2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21■□□□□ 0.95
CCDC162PA2VCL2 TERF1P2-201ENST00000583350 1212 ntBASIC21■□□□□ 0.95
CCDC162PA2VCL2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC162PA2VCL2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC162PA2VCL2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC162PA2VCL2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC162PA2VCL2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 CCDC92B-201ENST00000575506 885 ntBASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC162PA2VCL2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC162PA2VCL2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC162PA2VCL2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC162PA2VCL2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.96■□□□□ 0.95
CCDC162PA2VCL2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC162PA2VCL2 KRT18P14-201ENST00000534205 1250 ntBASIC20.96■□□□□ 0.95
CCDC162PA2VCL2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC162PA2VCL2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCDC162PA2VCL2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC162PA2VCL2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC162PA2VCL2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC162PA2VCL2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms