Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 AC027702.1-201ENST00000563810 1770 ntBASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 RPS2P35-201ENST00000443417 897 ntBASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 MIR4281-201ENST00000580852 62 ntBASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 OR7E47P-201ENST00000546390 1422 ntBASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV12-1A0A0B4J245 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 DUX4L9-201ENST00000449051 1259 ntBASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 PLK5-205ENST00000642079 1969 ntBASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV12-1A0A0B4J245 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 THA1P-201ENST00000590384 1145 ntBASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV12-1A0A0B4J245 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms