Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 AC005224.4-201ENST00000583262 1652 ntBASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV3-43A0A0B4J1X8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV3-43A0A0B4J1X8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 AC055733.4-201ENST00000638462 1354 ntBASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 AC005837.3-201ENST00000612163 286 ntBASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV3-43A0A0B4J1X8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 AC012414.1-201ENST00000556676 535 ntBASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 MIR6084-201ENST00000622012 110 ntBASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.4■□□□□ 0.38
IGHV3-43A0A0B4J1X8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
IGHV3-43A0A0B4J1X8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
IGHV3-43A0A0B4J1X8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
IGHV3-43A0A0B4J1X8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IGHV3-43A0A0B4J1X8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
IGHV3-43A0A0B4J1X8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms