Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AC004687.1-201ENST00000579003 1625 ntBASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.83□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 OR2I1P-207ENST00000453522 948 ntBASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 MIR4767-201ENST00000582827 78 ntBASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 AC110285.6-201ENST00000617652 491 ntBASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 AL355001.2-201ENST00000620617 1191 ntBASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 AC087239.1-201ENST00000622671 572 ntBASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 LINC01521-201ENST00000504184 1943 ntBASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 FEM1AP4-201ENST00000443167 1987 ntBASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 BX842568.3-201ENST00000418104 571 ntBASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-3A0A0A6YYJ7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms