Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGB6Q9Y5F9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 KRT18P61-201ENST00000585825 1298 ntBASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB6Q9Y5F9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 AC016769.1-201ENST00000409132 1010 ntBASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.83■□□□□ 0.77
PCDHGB6Q9Y5F9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGB6Q9Y5F9 AC009237.3-201ENST00000393279 1427 ntBASIC19.83■□□□□ 0.76
PCDHGB6Q9Y5F9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGB6Q9Y5F9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
PCDHGB6Q9Y5F9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDHGB6Q9Y5F9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PCDHGB6Q9Y5F9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGB6Q9Y5F9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGB6Q9Y5F9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 AC137761.2-201ENST00000561729 223 ntBASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 AC145350.3-201ENST00000569033 163 ntBASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PCDHGB6Q9Y5F9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 AC004854.2-201ENST00000608450 1441 ntBASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 AC026310.3-201ENST00000625186 2373 ntBASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGB6Q9Y5F9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 KRT18P11-201ENST00000435214 1283 ntBASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 AC092053.2-201ENST00000640557 1818 ntBASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PCDHGB6Q9Y5F9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 AC079140.4-201ENST00000507448 529 ntBASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB6Q9Y5F9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms