Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RARRES2P2-201ENST00000394842 485 ntBASIC19.91■□□□□ 0.78
AP4S1Q9Y587 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 AL031602.1-201ENST00000633169 911 ntBASIC19.91■□□□□ 0.78
AP4S1Q9Y587 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.91■□□□□ 0.78
AP4S1Q9Y587 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.9■□□□□ 0.78
AP4S1Q9Y587 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP4S1Q9Y587 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP4S1Q9Y587 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP4S1Q9Y587 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP4S1Q9Y587 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.9■□□□□ 0.78
AP4S1Q9Y587 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP4S1Q9Y587 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP4S1Q9Y587 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP4S1Q9Y587 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
AP4S1Q9Y587 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
AP4S1Q9Y587 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
AP4S1Q9Y587 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP4S1Q9Y587 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.89■□□□□ 0.77
AP4S1Q9Y587 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP4S1Q9Y587 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.89■□□□□ 0.77
AP4S1Q9Y587 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.89■□□□□ 0.77
AP4S1Q9Y587 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
AP4S1Q9Y587 AL499627.2-201ENST00000606283 725 ntBASIC19.89■□□□□ 0.77
AP4S1Q9Y587 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
AP4S1Q9Y587 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
AP4S1Q9Y587 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.87■□□□□ 0.77
AP4S1Q9Y587 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AP4S1Q9Y587 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 PLK5-205ENST00000642079 1969 ntBASIC19.85■□□□□ 0.77
AP4S1Q9Y587 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 AC137630.3-201ENST00000607245 391 ntBASIC19.85■□□□□ 0.77
AP4S1Q9Y587 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4S1Q9Y587 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms