Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 CA15P2-201ENST00000611168 834 ntBASIC20■□□□□ 0.79
LRCH1Q9Y2L9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH1Q9Y2L9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 RPS2P7-201ENST00000447334 885 ntBASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 AC087393.1-201ENST00000582896 145 ntBASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 AC010980.1-201ENST00000587192 1142 ntBASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH1Q9Y2L9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 RARRES2P1-201ENST00000474487 481 ntBASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LRCH1Q9Y2L9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LRCH1Q9Y2L9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.96■□□□□ 0.79
LRCH1Q9Y2L9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms