Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC007322.1-201ENST00000426983 750 ntBASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 TERF1P5-201ENST00000477545 1207 ntBASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 AC006970.2-201ENST00000450065 779 ntBASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN1Q9UMX0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 MIR663A-201ENST00000385250 93 ntBASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 CNN2P6-201ENST00000439038 900 ntBASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 AC013268.1-206ENST00000638368 961 ntBASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 AC112229.1-201ENST00000639295 961 ntBASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
UBQLN1Q9UMX0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBQLN1Q9UMX0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 ID1-201ENST00000376105 1233 ntBASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UBQLN1Q9UMX0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
UBQLN1Q9UMX0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.64■■□□□ 1.22
UBQLN1Q9UMX0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
UBQLN1Q9UMX0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.64■■□□□ 1.22
UBQLN1Q9UMX0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.64■■□□□ 1.22
UBQLN1Q9UMX0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.64■■□□□ 1.22
UBQLN1Q9UMX0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
UBQLN1Q9UMX0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBQLN1Q9UMX0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.64■■□□□ 1.21
UBQLN1Q9UMX0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBQLN1Q9UMX0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBQLN1Q9UMX0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBQLN1Q9UMX0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBQLN1Q9UMX0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms