Protein–RNA interactions for Protein: Q9UM07

PADI4, Protein-arginine deiminase type-4, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PADI4Q9UM07 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PADI4Q9UM07 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
PADI4Q9UM07 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.01■□□□□ 0.95
PADI4Q9UM07 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PADI4Q9UM07 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PADI4Q9UM07 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
PADI4Q9UM07 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PADI4Q9UM07 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PADI4Q9UM07 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.01■□□□□ 0.95
PADI4Q9UM07 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.01■□□□□ 0.95
PADI4Q9UM07 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.01■□□□□ 0.95
PADI4Q9UM07 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.01■□□□□ 0.95
PADI4Q9UM07 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.01■□□□□ 0.95
PADI4Q9UM07 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PADI4Q9UM07 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PADI4Q9UM07 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PADI4Q9UM07 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PADI4Q9UM07 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PADI4Q9UM07 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21■□□□□ 0.95
PADI4Q9UM07 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PADI4Q9UM07 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PADI4Q9UM07 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21■□□□□ 0.95
PADI4Q9UM07 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21■□□□□ 0.95
PADI4Q9UM07 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21■□□□□ 0.95
PADI4Q9UM07 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21■□□□□ 0.95
PADI4Q9UM07 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21■□□□□ 0.95
PADI4Q9UM07 AC073130.3-201ENST00000624389 2278 ntBASIC21■□□□□ 0.95
PADI4Q9UM07 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
PADI4Q9UM07 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PADI4Q9UM07 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21■□□□□ 0.95
PADI4Q9UM07 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21■□□□□ 0.95
PADI4Q9UM07 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PADI4Q9UM07 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PADI4Q9UM07 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
PADI4Q9UM07 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PADI4Q9UM07 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.99■□□□□ 0.95
PADI4Q9UM07 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PADI4Q9UM07 AC006970.2-201ENST00000450065 779 ntBASIC20.99■□□□□ 0.95
PADI4Q9UM07 AC104187.1-201ENST00000607510 612 ntBASIC20.99■□□□□ 0.95
PADI4Q9UM07 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.99■□□□□ 0.95
PADI4Q9UM07 KRT87P-202ENST00000534226 1464 ntBASIC20.99■□□□□ 0.95
PADI4Q9UM07 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PADI4Q9UM07 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PADI4Q9UM07 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PADI4Q9UM07 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PADI4Q9UM07 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PADI4Q9UM07 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PADI4Q9UM07 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PADI4Q9UM07 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.98■□□□□ 0.95
PADI4Q9UM07 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PADI4Q9UM07 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.98■□□□□ 0.95
PADI4Q9UM07 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PADI4Q9UM07 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.98■□□□□ 0.95
PADI4Q9UM07 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.98■□□□□ 0.95
PADI4Q9UM07 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.98■□□□□ 0.95
PADI4Q9UM07 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.98■□□□□ 0.95
PADI4Q9UM07 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PADI4Q9UM07 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PADI4Q9UM07 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PADI4Q9UM07 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PADI4Q9UM07 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PADI4Q9UM07 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PADI4Q9UM07 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
PADI4Q9UM07 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PADI4Q9UM07 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PADI4Q9UM07 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.97■□□□□ 0.95
PADI4Q9UM07 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.97■□□□□ 0.95
PADI4Q9UM07 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.97■□□□□ 0.95
PADI4Q9UM07 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PADI4Q9UM07 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PADI4Q9UM07 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PADI4Q9UM07 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PADI4Q9UM07 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PADI4Q9UM07 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.97■□□□□ 0.95
PADI4Q9UM07 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PADI4Q9UM07 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.96■□□□□ 0.95
PADI4Q9UM07 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PADI4Q9UM07 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.96■□□□□ 0.95
PADI4Q9UM07 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PADI4Q9UM07 CROCCP5-201ENST00000436658 830 ntBASIC20.96■□□□□ 0.95
PADI4Q9UM07 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.96■□□□□ 0.95
PADI4Q9UM07 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PADI4Q9UM07 AC079089.2-201ENST00000531211 1277 ntBASIC20.96■□□□□ 0.95
PADI4Q9UM07 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.96■□□□□ 0.95
PADI4Q9UM07 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.96■□□□□ 0.95
PADI4Q9UM07 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PADI4Q9UM07 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PADI4Q9UM07 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PADI4Q9UM07 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PADI4Q9UM07 LINC01960-201ENST00000563759 1884 ntBASIC20.96■□□□□ 0.95
PADI4Q9UM07 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PADI4Q9UM07 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PADI4Q9UM07 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PADI4Q9UM07 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PADI4Q9UM07 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PADI4Q9UM07 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PADI4Q9UM07 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PADI4Q9UM07 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.95■□□□□ 0.94
PADI4Q9UM07 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PADI4Q9UM07 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms