Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 AL024507.2-201ENST00000606070 2574 ntBASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 AF106564.1-201ENST00000607058 2553 ntBASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHRNA9Q9UGM1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA9Q9UGM1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA9Q9UGM1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA9Q9UGM1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA9Q9UGM1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.19■□□□□ 0.66
CHRNA9Q9UGM1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA9Q9UGM1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA9Q9UGM1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA9Q9UGM1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.19■□□□□ 0.66
CHRNA9Q9UGM1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA9Q9UGM1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 AC079140.4-201ENST00000507448 529 ntBASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA9Q9UGM1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 TERF1P2-201ENST00000583350 1212 ntBASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA9Q9UGM1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHRNA9Q9UGM1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNA9Q9UGM1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNA9Q9UGM1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNA9Q9UGM1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms