Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 KRT19P1-201ENST00000405746 1186 ntBASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 AC053503.5-201ENST00000601508 636 ntBASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PARPBPQ9NWS1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PARPBPQ9NWS1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 AP004607.4-201ENST00000530158 1459 ntBASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 AL162430.1-201ENST00000480705 870 ntBASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PARPBPQ9NWS1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 KRT18P5-201ENST00000436075 1291 ntBASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 EEF1DP3-203ENST00000566025 782 ntBASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PARPBPQ9NWS1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 AC004854.2-201ENST00000608450 1441 ntBASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PARPBPQ9NWS1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 AC010542.4-201ENST00000563151 1910 ntBASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 AC026471.6-201ENST00000622954 1905 ntBASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PARPBPQ9NWS1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PARPBPQ9NWS1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms