Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 AC026310.3-201ENST00000625186 2373 ntBASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBQLN4Q9NRR5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBQLN4Q9NRR5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBQLN4Q9NRR5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
UBQLN4Q9NRR5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 AC097381.1-201ENST00000429019 1296 ntBASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.38■□□□□ 0.69
UBQLN4Q9NRR5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 AC007375.3-201ENST00000600936 2314 ntBASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
UBQLN4Q9NRR5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 MIR6821-201ENST00000617625 74 ntBASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN4Q9NRR5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN4Q9NRR5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN4Q9NRR5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN4Q9NRR5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN4Q9NRR5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms