Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 AC003102.1-202ENST00000563394 1796 ntBASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTPS2Q9NRF8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.54■□□□□ 0.72
CTPS2Q9NRF8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 SMUG1P1-201ENST00000590640 811 ntBASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTPS2Q9NRF8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 AL034346.1-201ENST00000568244 1277 ntBASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTPS2Q9NRF8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CTPS2Q9NRF8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CTPS2Q9NRF8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.52■□□□□ 0.71
CTPS2Q9NRF8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTPS2Q9NRF8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTPS2Q9NRF8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.5■□□□□ 0.71
CTPS2Q9NRF8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms