Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDLIM7Q9NR12 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PDLIM7Q9NR12 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.75■■□□□ 1.39
PDLIM7Q9NR12 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 AP006587.3-201ENST00000525742 1516 ntBASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 AC233723.2-201ENST00000623798 2106 ntBASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 AC007322.4-201ENST00000509611 723 ntBASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 OR10C1-204ENST00000622521 1039 ntBASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDLIM7Q9NR12 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 AL158047.1-201ENST00000445918 881 ntBASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 MYC-209ENST00000641252 345 ntBASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.73■■□□□ 1.39
PDLIM7Q9NR12 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 AC016405.3-201ENST00000607710 860 ntBASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
PDLIM7Q9NR12 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 AC242852.2-201ENST00000615738 1807 ntBASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 RPS2P4-201ENST00000476944 856 ntBASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 GUSBP5-202ENST00000510805 1989 ntBASIC23.71■■□□□ 1.39
PDLIM7Q9NR12 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 AL512625.2-201ENST00000417533 625 ntBASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 AC142381.4-202ENST00000563973 229 ntBASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDLIM7Q9NR12 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms