Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HINT3Q9NQE9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.01■□□□□ 0.63
HINT3Q9NQE9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HINT3Q9NQE9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
HINT3Q9NQE9 AL355001.2-201ENST00000620617 1191 ntBASIC19.01■□□□□ 0.63
HINT3Q9NQE9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.01■□□□□ 0.63
HINT3Q9NQE9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HINT3Q9NQE9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HINT3Q9NQE9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HINT3Q9NQE9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HINT3Q9NQE9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.01■□□□□ 0.63
HINT3Q9NQE9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19■□□□□ 0.63
HINT3Q9NQE9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HINT3Q9NQE9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HINT3Q9NQE9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19■□□□□ 0.63
HINT3Q9NQE9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HINT3Q9NQE9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19■□□□□ 0.63
HINT3Q9NQE9 AC142381.2-201ENST00000566120 298 ntBASIC19■□□□□ 0.63
HINT3Q9NQE9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 FEM1AP1-201ENST00000431297 1995 ntBASIC19■□□□□ 0.63
HINT3Q9NQE9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19■□□□□ 0.63
HINT3Q9NQE9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19■□□□□ 0.63
HINT3Q9NQE9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.99■□□□□ 0.63
HINT3Q9NQE9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.99■□□□□ 0.63
HINT3Q9NQE9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HINT3Q9NQE9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HINT3Q9NQE9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 AP006587.3-201ENST00000525742 1516 ntBASIC18.96■□□□□ 0.63
HINT3Q9NQE9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms