Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 BX005040.4-201ENST00000637145 1518 ntBASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 AC005224.4-201ENST00000583262 1652 ntBASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEUROD4Q9HD90 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 AL031432.3-201ENST00000607698 485 ntBASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.86■□□□□ 0.77
NEUROD4Q9HD90 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEUROD4Q9HD90 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.85■□□□□ 0.77
NEUROD4Q9HD90 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEUROD4Q9HD90 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NEUROD4Q9HD90 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEUROD4Q9HD90 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEUROD4Q9HD90 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
NEUROD4Q9HD90 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.85■□□□□ 0.77
NEUROD4Q9HD90 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEUROD4Q9HD90 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NEUROD4Q9HD90 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 AL049796.1-201ENST00000565336 1766 ntBASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 AC105265.2-201ENST00000467189 838 ntBASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 AL136967.2-201ENST00000623968 743 ntBASIC19.83■□□□□ 0.77
NEUROD4Q9HD90 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.83■□□□□ 0.76
NEUROD4Q9HD90 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NEUROD4Q9HD90 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NEUROD4Q9HD90 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEUROD4Q9HD90 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.82■□□□□ 0.76
NEUROD4Q9HD90 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEUROD4Q9HD90 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.82■□□□□ 0.76
NEUROD4Q9HD90 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.82■□□□□ 0.76
NEUROD4Q9HD90 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEUROD4Q9HD90 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.82■□□□□ 0.76
NEUROD4Q9HD90 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
NEUROD4Q9HD90 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.82■□□□□ 0.76
NEUROD4Q9HD90 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.82■□□□□ 0.76
NEUROD4Q9HD90 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEUROD4Q9HD90 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms